Related papers: A W[1]-Completeness Result for Generalized Permuta…
The Set Packing problem is, given a collection of sets $\mathcal{S}$ over a ground set $\mathcal{U}$, to find a maximum collection of sets that are pairwise disjoint. The problem is among the most fundamental NP-hard optimization problems…
The central conjecture of parameterized complexity states that FPT is not equal to W[1], and is generally regarded as the parameterized counterpart to P != NP. We revisit the issue of the plausibility of FPT != W[1], focusing on two…
In the Determinant Maximization problem, given an $n\times n$ positive semi-definite matrix $\bf{A}$ in $\mathbb{Q}^{n\times n}$ and an integer $k$, we are required to find a $k\times k$ principal submatrix of $\bf{A}$ having the maximum…
We study the complexity of the decision problem known as Permutation Pattern Matching, or PPM. The input of PPM consists of a pair of permutations $\tau$ (the `text') and $\pi$ (the `pattern'), and the goal is to decide whether $\tau$…
Given a graph G, a matching is a subset of edges of G that do not share an endpoint. A matching M is uniquely restricted if the subgraph induced by the endpoints of the edges of M has exactly one perfect matching. Given a graph G and a…
A permutation $\pi$ contains a permutation $\sigma$ as a pattern if it contains a subsequence of length $|\sigma|$ whose elements are in the same relative order as in the permutation $\sigma$. This notion plays a major role in enumerative…
In the last years, different types of patterns in permutations have been studied: vincular, bivincular and mesh patterns, just to name a few. Every type of permutation pattern naturally defines a corresponding computational problem: Given a…
A parameterized string (p-string) is a string over an alphabet $(\Sigma_{s} \cup \Sigma_{p})$, where $\Sigma_{s}$ and $\Sigma_{p}$ are disjoint alphabets for static symbols (s-symbols) and for parameter symbols (p-symbols), respectively.…
Genome rearrangement is a common model for molecular evolution. In this paper, we consider the Pairwise Rearrangement problem, which takes as input two genomes and asks for the number of minimum-length sequences of permissible operations…
Given an indeterminate string pattern $p$ and an indeterminate string text $t$, the problem of order-preserving pattern matching with character uncertainties ($\mu$OPPM) is to find all substrings of $t$ that satisfy one of the possible…
Optimal Morse matchings reveal essential structures of cell complexes which lead to powerful tools to study discrete geometrical objects, in particular discrete 3-manifolds. However, such matchings are known to be NP-hard to compute on…
Pattern matching with wildcards is the problem of finding all factors of a text $t$ of length $n$ that match a pattern $x$ of length $m$, where wildcards (characters that match everything) may be present. In this paper we present a number…
Pattern matching is a fundamental process in almost every scientific domain. The problem involves finding the positions of a given pattern (usually of short length) in a reference stream of data (usually of large length). The matching can…
A resolving set $S$ of a graph $G$ is a subset of its vertices such that no two vertices of $G$ have the same distance vector to $S$. The Metric Dimension problem asks for a resolving set of minimum size, and in its decision form, a…
In this paper, we consider a variant of the classical algorithmic problem of checking whether a given word $v$ is a subsequence of another word $w$. More precisely, we consider the problem of deciding, given a number $p$ (defining a…
In runtime verification, pattern matching, which searches for occurrences of a specific pattern within a word, provides more information than a simple violation detection of the monitored property, by locating concrete evidence of the…
The NP-hard general factor problem asks, given a graph and for each vertex a list of integers, whether the graph has a spanning subgraph where each vertex has a degree that belongs to its assigned list. The problem remains NP-hard even if…
In this paper we study the problem of finding a small safe set $S$ in a graph $G$, i.e. a non-empty set of vertices such that no connected component of $G[S]$ is adjacent to a larger component in $G - S$. We enhance our understanding of the…
We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…
The concept of NP-completeness has been proposed for half a century, and it is conjectured that there are no subexponential-time algorithms for NP-hard problems, which is known as the Exponential Time Hypothesis (ETH). As a pivotal…