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Biological networks such as gene regulatory networks possess desirable properties. They are more robust and controllable than random networks. This motivates the search for structural and dynamical features that evolution has incorporated…

Molecular Networks · Quantitative Biology 2024-02-16 Claus Kadelka , David Murrugarra

In the last decade, there has been a growing body of literature addressing the utilization of complex network methods for the characterization of dynamical systems based on time series. While both nonlinear time series analysis and complex…

Data Analysis, Statistics and Probability · Physics 2025-02-03 Yong Zou , Reik V. Donner , Norbert Marwan , Jonathan F. Donges , Jürgen Kurths

Boolean networks (BNs) are discrete-time systems where nodes are inter-connected (here we call such connection rule among nodes as network structure), and the dynamics of each gene node is determined by logical functions. In this paper, we…

Systems and Control · Electrical Eng. & Systems 2020-11-03 Jie Zhong , Daniel W. C. Ho , Jianquan Lu

Complex dynamical systems are prevalent in various domains, but their analysis and prediction are hindered by their high dimensionality and nonlinearity. Dimensionality reduction techniques can simplify the system dynamics by reducing the…

Dynamical Systems · Mathematics 2023-11-28 Chengyi Tu , Ying Fan , Tianyu Shi

Complex systems and relational data are often abstracted as dynamical processes on networks. To understand, predict and control their behavior, a crucial step is to extract reduced descriptions of such networks. Inspired by notions from…

Social and Information Networks · Computer Science 2019-06-26 Michael T. Schaub , Jean-Charles Delvenne , Renaud Lambiotte , Mauricio Barahona

In this paper, we study controllability of a network of linear single-integrator agents when the network size goes to infinity. We first investigate the effect of increasing size by injecting an input at every node and requiring that…

Systems and Control · Computer Science 2016-11-17 Chinwendu Enyioha , Mohammad Amin Rahimian , George J. Pappas , Ali Jadbabaie

To understand the controllability of complex networks is a forefront problem relevant to different fields of science and engineering. Despite recent advances in network controllability theories, an outstanding issue is to understand the…

Physics and Society · Physics 2016-07-01 Zhesi Shen , Wen-Xu Wang , Chen Zhao , Ying-Cheng Lai

Dynamic systems characterized by diversified evolutions are not only more flexible, but also more resilient to attacks, failures and changing conditions. This article addresses the quantification of the diversity of non-linear transient…

Physics and Society · Physics 2008-01-07 Luciano da Fontoura Costa

Flow networks are essential for both living organisms and enginneered systems. These networks often present complex dynamics controlled, at least in part, by their topology. Previous works have shown that topologically complex networks…

Soft Condensed Matter · Physics 2020-03-24 Miguel Ruiz-Garcia , Eleni Katifori

Control of complex systems involves both system identification and controller design. Deep neural networks have proven to be successful in many identification tasks, however, from model-based control perspective, these networks are…

Optimization and Control · Mathematics 2019-02-28 Yize Chen , Yuanyuan Shi , Baosen Zhang

This work presents a control-oriented identification scheme for efficient control design and stability analysis of nonlinear systems. Neural networks are used to identify a discrete-time nonlinear state-space model to approximate…

Systems and Control · Electrical Eng. & Systems 2024-10-04 Maxime Thieffry , Alexandre Hache , Mohamed Yagoubi , Philippe Chevrel

A recent article by Weidner et al. [2021] presents a method to extract graph properties that are predictive of the dynamical behavior of multivariate, discrete models of biochemical regulation. In other words, a method that uses only…

Quantitative Methods · Quantitative Biology 2021-10-22 Luis M. Rocha

This paper presents conditions for establishing topological controllability in undirected networks of diffusively coupled agents. Specifically, controllability is considered based on the signs of the edges (negative, positive or zero). Our…

Systems and Control · Computer Science 2019-03-28 Hyo-Sung Ahn , Kevin L. Moore , Seong-Ho Kwon , Quoc Van Tran , Byeong-Yeon Kim , Kwang-Kyo Oh

Symmetries are an essential feature of complex networks as they regulate how the graph collective dynamics organizes into clustered states. We here show how to control network symmetries, and how to enforce patterned states of…

Physics and Society · Physics 2020-11-24 L. V. Gambuzza , M. Frasca , F. Sorrentino , L. M. Pecora , S. Boccaletti

Identifying a linear system model from data has wide applications in control theory. The existing work on finite sample analysis for linear system identification typically uses data from a single system trajectory under i.i.d random inputs,…

Systems and Control · Electrical Eng. & Systems 2023-09-19 Lei Xin , George Chiu , Shreyas Sundaram

The proliferation of networked devices, systems, and applications that we depend on every day makes managing networks more important than ever. The increasing security, availability, and performance demands of these applications suggest…

Networking and Internet Architecture · Computer Science 2017-11-01 Nick Feamster , Jennifer Rexford

In this paper, we consider the problem of tuning the edge weights of a networked system described by linear time-invariant dynamics. We assume that the topology of the underlying network is fixed and that the set of feasible edge weights is…

Optimization and Control · Mathematics 2020-01-07 Cassiano O. Becker , Sérgio Pequito , George J. Pappas , Victor M. Preciado

Previous work in Boolean dynamical networks has suggested that the number of components that must be controlled to select an existing attractor is typically set by the number of attractors admitted by the dynamics, with no dependence on the…

Molecular Networks · Quantitative Biology 2024-10-11 Bryan C. Daniels , Enrico Borriello

The study of population dynamics originated with early sociological works but has since extended into many fields, including biology, epidemiology, evolutionary game theory, and economics. Most studies on population dynamics focus on the…

Machine Learning · Computer Science 2024-06-07 Noah Golowich , Elad Hazan , Zhou Lu , Dhruv Rohatgi , Y. Jennifer Sun

We propose a new measure to quantify the impact of a node $i$ in controlling a directed network. This measure, called `control contribution' $\mathcal{C}_{i}$, combines the probability for node $i$ to appear in a set of driver nodes and the…

Social and Information Networks · Computer Science 2019-06-12 Yan Zhang , Antonios Garas , Frank Schweitzer