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We study the problem of visualizing large-scale and high-dimensional data in a low-dimensional (typically 2D or 3D) space. Much success has been reported recently by techniques that first compute a similarity structure of the data points…

Machine Learning · Computer Science 2016-04-06 Jian Tang , Jingzhou Liu , Ming Zhang , Qiaozhu Mei

Drawing and visualisation of molecular structures are some of the most common tasks carried out in structural glycobiology, typically using various software. In this perspective article, we outline developments in the computational tools…

Quantitative Methods · Quantitative Biology 2020-10-07 Kanhaya Lal , Rafael Bermeo , Serge Pérez

Scientists often explore and analyze large-scale scientific simulation data by leveraging two- and three-dimensional visualizations. The data and tasks can be complex and therefore best supported using myriad display technologies, from…

Human-Computer Interaction · Computer Science 2024-04-30 Thomas Marrinan , Madeleine Moeller , Alina Kanayinkal , Victor A. Mateevitsi , Michael E. Papka

In many scientific research fields, understanding and visualizing a black-box function in terms of the effects of all the input variables is of great importance. Existing visualization tools do not allow one to visualize the effects of all…

Machine Learning · Computer Science 2023-03-08 Shengtong Zhang , Daniel W. Apley

Recent advances in quantum computing have brought us closer to realizing the potential of this transformative technology. While significant strides have been made in quantum error correction, many challenges persist, particularly in the…

Quantum Physics · Physics 2025-12-03 Mateusz Meller , Vendel Szeremi , Oliver Thomson Brown

Visualization tools for supervised learning allow users to interpret, introspect, and gain an intuition for the successes and failures of their models. While reinforcement learning practitioners ask many of the same questions, existing…

Machine Learning · Computer Science 2020-08-20 Shuby Deshpande , Benjamin Eysenbach , Jeff Schneider

Constructive visualization uses physical data units - tokens - to enable non-experts to create personalized visualizations engagingly. However, its physical nature limits efficiency and scalability. One potential solution to address this…

Human-Computer Interaction · Computer Science 2023-08-09 Wei Wei , Samuel Huron , Yvonne Jansen

A recent development, called isogeometric analysis, provides a unified approach for design, analysis and optimization of functional products in industry. Traditional volume rendering methods for inspecting the results from the numerical…

Graphics · Computer Science 2015-05-08 Franz G. Fuchs , Jon M. Hjelmervik

Although many tools have been presented in the research literature of software visualization, there is little evidence of their adoption. To choose a suitable visualization tool, practitioners need to analyze various characteristics of…

Software Engineering · Computer Science 2019-08-13 Leonel Merino , Ekaterina Kozlova , Oscar Nierstrasz , Daniel Weiskopf

Automatic side-by-side evaluation has emerged as a promising approach to evaluating the quality of responses from large language models (LLMs). However, analyzing the results from this evaluation approach raises scalability and…

Visualisation is an effective way to facilitate the analysis and understanding of multivariate data. In the context of multi-objective optimisation, comparing to quantitative performance metrics, visualisation is, in principle, able to…

Neural and Evolutionary Computing · Computer Science 2019-03-06 Huiru Gao , Haifeng Nie , Ke Li

Software visualizations are usually realized as standalone and isolated tools that use embedded code viewers within the visualization. In the context of program comprehension, only few approaches integrate visualizations into code editors,…

Software Engineering · Computer Science 2023-08-31 Alexander Krause-Glau , Wilhelm Hasselbring

The present contribution suggests the use of a multidimensional scaling (MDS) algorithm as a visualization tool for manifold-valued elements. A visualization tool of this kind is useful in signal processing and machine learning whenever…

Machine Learning · Statistics 2013-03-08 Simone Fiori

Quantum computing, an innovative computing system carrying prominent processing rate, is meant to be the solutions to problems in many fields. Among these realms, the most intuitive application is to help chemical researchers correctly…

Quantum Physics · Physics 2022-12-29 Qingchun Wang , Huan-Yu Liu , Qing-Song Li , Jianyu Zhao , Qiankun Gong , Ye Li , Yu-Chun Wu , Guo-Ping Guo

Molecular visualization software has long supported research and education in chemical and structural sciences, but consumer devices constrained to 2D inputs and outputs pose two major challenges: they poorly convey 3D nature, and 3D…

Chemical Physics · Physics 2025-09-05 Luciano A. Abriata

The scanning transmission electron microscope, a workhorse instrument in materials characterization, is being transformed into an atomic-scale material manipulation platform. With an eye on the trajectory of recent developments and the…

Applied Physics · Physics 2023-08-15 Ondrej Dyck , Andrew R. Lupini , Stephen Jesse

Data visualizations are powerful tools for communicating patterns in quantitative data. Yet understanding any data visualization is no small feat -- succeeding requires jointly making sense of visual, numerical, and linguistic inputs…

Human-Computer Interaction · Computer Science 2025-05-26 Arnav Verma , Kushin Mukherjee , Christopher Potts , Elisa Kreiss , Judith E. Fan

The goal of this paper is to deliver the overview of the current state of the art, to provide experience report on developing quantum software tools, and to outline the perspective for developing quantum programming tools supporting…

Quantum Physics · Physics 2023-09-14 Jarosław Adam Miszczak

As computer simulations progress to increasingly complex, non-linear, and three-dimensional systems and phenomena, intuitive and immediate visualization of their results is becoming crucial. While Virtual Reality (VR) and Natural User…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-09 Aryaman Gupta , Ulrik Günther , Pietro Incardona , Ata Deniz Aydin , Raimund Dachselt , Stefan Gumhold , Ivo F. Sbalzarini

Recent technological innovations have led to an increase in the availability of 3D urban data, such as shadow, noise, solar potential, and earthquake simulations. These spatiotemporal datasets create opportunities for new visualizations to…

Human-Computer Interaction · Computer Science 2023-03-08 Roberta Mota , Nivan Ferreira , Julio Daniel Silva , Marius Horga , Marcos Lage , Luis Ceferino , Usman Alim , Ehud Sharlin , Fabio Miranda