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The functions of many networked systems in physics, biology or engineering rely on a coordinated or synchronized dynamics of its constituents. In power grids for example, all generators must synchronize and run at the same frequency and…

Adaptation and Self-Organizing Systems · Physics 2017-09-13 Debsankha Manik , Marc Timme , Dirk Witthaut

Ring oscillators are biochemical circuits consisting of a ring of interactions capable of sustained oscillations. The non-linear interactions between genes hinder the analytical insight into their function, usually requiring computational…

Molecular Networks · Quantitative Biology 2018-02-19 Karen M. Page , Ruben Perez-Carrasco

Synchronization phenomena are pervasive in biology. In neuronal networks, the mechanisms of synchronization have been extensively studied from both physiological and computational viewpoints. The functional role of synchronization has also…

Neurons and Cognition · Quantitative Biology 2009-06-18 Nicolas Tabareau , Jean-Jacques Slotine , Quang-Cuong Pham

Networks of fast-spiking interneurons are crucial for the generation of neural oscillations in the brain. Here we study the synchronous behavior of interneuronal networks that are coupled by delayed inhibitory and fast electrical synapses.…

Neurons and Cognition · Quantitative Biology 2012-06-22 Daqing Guo , Qingyun Wang , Matjaz Perc

Sustained rhythmic oscillations, pulsing dynamics, emerge spontaneously when the local connection scheme is randomised in 3-value cellular automata that feature"glider" dynamics. Time-plots of pulsing measures maintain a distinct waveform…

Cellular Automata and Lattice Gases · Physics 2021-03-02 Andrew Wuensche , Edward Coxon

Self-organized quasi periodicity is one of the most puzzling dynamical phases observed in systems of non linear coupled oscillators. The single dynamical units are not locked to the periodic mean field they produce, but they still feature a…

Disordered Systems and Neural Networks · Physics 2015-06-19 Raffaella Burioni , Serena Di Santo , Matteo di Volo , Alessandro Vezzani

We study synchronization of sinusoidally coupled phase oscillators on networks with modular structure and a large number of oscillators in each community. Of particular interest is the hierarchy of local and global synchrony, i.e.,…

Chaotic Dynamics · Physics 2012-01-19 Per Sebastian Skardal , Juan G. Restrepo

The synchronization of human networks is essential for our civilization, and understanding the motivations, behavior, and basic parameters that govern the dynamics of human networks is important in many aspects of our lives. Human ensembles…

Adaptation and Self-Organizing Systems · Physics 2020-08-26 Shir Shahal , Ateret Wurzberg , Inbar Sibony , Hamootal Duadi , Elad Shniderman , Daniel Weymouth , Nir Davidson , Moti Fridman

The time elapsed model describes the firing activity of an homogeneous assembly of neurons thanks to the distribution of times elapsed since the last discharge. It gives a mathematical description of the probability density of neurons…

Analysis of PDEs · Mathematics 2011-09-16 Khashayar Pakdaman , Benoît Perthame , Delphine Salort

Frequency modulation by perturbation is the essential trait that differentiates limit cycle oscillators from phase oscillators. We studied networks of identical limit cycle oscillators whose frequencies are modulated sensitively by the…

Adaptation and Self-Organizing Systems · Physics 2015-05-13 Masashi Tachikawa

Ensembles of phase-oscillators are known to exhibit a variety of collective regimes. Here, we show that a simple mean-field model involving two heterogenous populations of pulse-coupled oscillators, exhibits, in the strong-coupling limit, a…

Disordered Systems and Neural Networks · Physics 2024-07-12 German Mato , Antonio Politi , Alessandro Torcini

The problem of reliability of the dynamics in biological regulatory networks is studied in the framework of a generalized Boolean network model with continuous timing and noise. Using well-known artificial genetic networks such as the…

Molecular Networks · Quantitative Biology 2008-05-28 Stefan Braunewell , Stefan Bornholdt

In networks of coupled oscillators, it is of interest to understand how interaction topology affects synchronization. Many studies have gained key insights into this question by studying the classic Kuramoto oscillator model on static…

Adaptation and Self-Organizing Systems · Physics 2020-09-29 William Qian , Lia Papadopoulos , Zhixin Lu , Keith Wiley , Fabio Pasqualetti , Danielle S. Bassett

Systems of oscillators subject to time-dependent noise typically achieve synchronization for long times when their mutual coupling is sufficiently strong. The dynamical process whereby synchronization is reached can be thought of as a…

Statistical Mechanics · Physics 2024-11-11 Ricardo Gutierrez , Rodolfo Cuerno

Organisms are equipped with regulatory systems that display a variety of dynamical behaviours ranging from simple stable steady states, to switching and multistability, to oscillations. Earlier work has shown that oscillations in protein…

Molecular Networks · Quantitative Biology 2009-11-13 Simone Pigolotti , Sandeep Krishna , Mogens H. Jensen

Many biological and neural systems can be seen as networks of interacting periodic processes. Importantly, their functionality depends on the emerging collective dynamics of the network. Synchrony of oscillations is one of the most…

Adaptation and Self-Organizing Systems · Physics 2020-05-29 Christian Bick , Marc Goodfellow , Carlo R. Laing , Erik A. Martens

The stability (or instability) of synchronization is important in a number of real world systems, including the power grid, the human brain and biological cells. For identical synchronization, the synchronizability of a network, which can…

Chaotic Dynamics · Physics 2018-04-17 Jeremie Fish , Jie Sun

We investigate the existence of an optimal interplay between the natural frequencies of a group chaotic oscillators and the topological properties of the network they are embedded in. We identify the conditions for achieving phase…

Adaptation and Self-Organizing Systems · Physics 2017-01-13 Per Sebastian Skardal , Ricardo Sevilla-Escoboza , Victor Vera-Ávila , Javier Martín Buldú

We study the effect of coupling delay in a regular network with a ring topology and in a more complex network with an all-to-all (global) topology in the presence of impurities (disorder). We find that the coupling delay is capable of…

Chaotic Dynamics · Physics 2011-12-26 D. V. Senthilkumar , R. Suresh , Jane H. Sheeba , M. Lakshmanan , J. Kurths

Circadian clocks play a pivotal role in orchestrating numerous physiological and developmental events. Waveform shapes of the oscillations of protein abundances can be informative about the underlying biochemical processes of circadian…

Subcellular Processes · Quantitative Biology 2018-11-27 Hang-Hyun Jo , Yeon Jeong Kim , Jae Kyoung Kim , Mathias Foo , David E. Somers , Pan-Jun Kim