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This study focuses on comparing the individual polymer chain dynamics in an entangled polymeric liquid under different shear and extension rates. Polymer chains under various shear rates and extension rates were simulated using a…

Chemical Physics · Physics 2021-01-15 Behrouz Behdani , Tong Mou , Cody Spratt , Slava Butcovich , Ryan Gettler , Joontaek Park

The entropic pressure in the vicinity of a cubic lattice knot is examined as a model of the entropic pressure near a knotted ring polymer in a good solvent. A model for the scaling of the pressure is developed and this is tested numerically…

Statistical Mechanics · Physics 2015-06-19 EJ Janse van Rensburg

We give computational results to study the accuracy of several quasicontinuum methods for two benchmark problems - the stability of a Lomer dislocation pair under shear and the stability of a lattice to plastic slip under tensile loading.…

Numerical Analysis · Mathematics 2015-03-17 Brian Van Koten , Xingjie Helen Li , Mitchell Luskin , Christoph Ortner

We investigate local and global properties of the one-dimensional Bose-Hubbard model with an external confining potential, describing an atomic condensate in an optical lattice. Using quantum Monte Carlo techniques we demonstrate that a…

Statistical Mechanics · Physics 2009-11-10 Sara Bergkvist , Patrik Henelius , Anders Rosengren

Exact free energy minimization is a convex optimization problem that is usually approximated with stochastic sampling methods. Deterministic approximations have been less successful because many desirable properties have been difficult to…

Computational Physics · Physics 2016-03-17 Jonathan E. Moussa

We generalise the non-affine theory of viscoelasticity for use with large, well-sampled systems of arbitrary chemical complexity. Having in mind predictions of mechanical and vibrational properties of amorphous systems with atomistic…

Disordered Systems and Neural Networks · Physics 2020-07-27 Ivan Kriuchevskyi , Vladimir V. Palyulin , Rico Milkus , Robert M. Elder , Timothy W. Sirk , Alessio Zaccone

We question the network affinity assumption in modeling chain orientations under polymer deformations, and the use of the stretch measure projected from the right Cauchy-Green deformation tensor (or non-affine micro-stretches derived from…

Soft Condensed Matter · Physics 2021-02-03 Victor Jesus Amores , Khanh Nguyen , Francisco Javier Montans

Differences in core level binding energies between atoms belonging to the same chemical species can be related to differences in their intra- and extra-atomic charge distributions, and differences in how their core holes are screened. With…

Materials Science · Physics 2014-02-14 T. L. Underwood , R. J. Cole

Concurrent multiscale methods play an important role in modeling and simulating materials with defects, aiming to achieve the balance between accuracy and efficiency. Atomistic-to-continuum (a/c) coupling methods, a typical class of…

Numerical Analysis · Mathematics 2025-02-27 Junfeng Lu , Hao Wang , Yangshuai Wang

The application of molecular dynamics (MD) simulations to the interpretation of Raman scattering spectra is hindered by inability of atomistic simulations to account for the dynamic evolution of electronic polarizability, requiring the use…

Materials Science · Physics 2023-04-18 Atanu Paul , Anthony Ruffino , Stefan Masiuk , Jonathan Spanier , Ilya Grinberg

We construct a finite element approximation of a strain-limiting elastic model on a bounded open domain in $\mathbb{R}^d$, $d \in \{2,3\}$. The sequence of finite element approximations is shown to exhibit strong convergence to the unique…

Numerical Analysis · Mathematics 2020-04-02 Andrea Bonito , Vivette Girault , Endre Süli

We focus here on the thermodynamic properties of adsorbates formed by two-species $A+B \to \oslash$ reactions on a one-dimensional infinite lattice with heterogeneous "catalytic" properties. In our model hard-core $A$ and $B$ particles…

Statistical Mechanics · Physics 2020-09-17 Dmytro Shapoval , Maxym Dudka , Olivier Bénichou , Gleb Oshanin

Single linear polymer chains in dilute solutions under good solvent conditions are studied by Monte Carlo simulations with the pruned-enriched Rosenbluth method up to the chain length $N \sim {\cal O}(10^4)$. Based on the standard simple…

Soft Condensed Matter · Physics 2015-06-24 Hsiao-Ping Hsu

The simulation of a protein's folding process is often done via stochastic local search, which requires a procedure to apply structural changes onto a given conformation. Here, we introduce a constraint-based approach to enumerate lattice…

Computational Engineering, Finance, and Science · Computer Science 2009-10-21 Martin Mann , Mohamed Abou Hamra , Kathleen Steinhöfel , Rolf Backofen

Compact lattice Quantum Electrodynamics is a complex quantum field theory with dynamical gauge and matter fields and it has similarities with Quantum Chromodynamics, in particular asymptotic freedom and confinement. We consider a…

High Energy Physics - Lattice · Physics 2024-12-11 Arianna Crippa , Karl Jansen , Enrico Rinaldi

Various models have been proposed in which the Schr\"odinger equation is modified to account for a decay of spatial coherences of massive objects. While optomechanical systems and matter-wave interferometry with large clusters are promising…

Quantum Physics · Physics 2016-01-21 Jiří Minář , Pavel Sekatski , Robin Stevenson , Nicolas Sangouard

The shear response of soft solids can be modeled with linear elasticity, provided the forcing is slow and weak. Both of these approximations must break down when the material loses rigidity, such as in foams and emulsions at their…

Soft Condensed Matter · Physics 2016-07-06 Julia Boschan , Daniel Vagberg , Ellak Somfai , Brian P. Tighe

Predicting the mechanics of large structural networks, such as beam-based architected materials, requires a multiscale computational strategy that preserves information about the discrete structure while being applicable to large assemblies…

Computational Engineering, Finance, and Science · Computer Science 2024-03-15 Kevin Kraschewski , Gregory P. Phlipot , Dennis M. Kochmann

The emergence of scanning probe and electron beam imaging techniques have allowed quantitative studies of atomic structure and minute details of electronic and vibrational structure on the level of individual atomic units. These microscopic…

Statistical Mechanics · Physics 2020-01-22 Sai Mani Prudhvi Valleti , Lukas Vlcek , Maxim Ziatdinov , Rama K. Vasudevan , Sergei V. Kalinin

A semiclassical theory of chaotic atomic transport in a one-dimensional nondissipative optical lattice is developed. Using the basic equations of motion for the Bloch and translational atomic variables, we derive a stochastic map for the…

Quantum Physics · Physics 2009-11-13 V. Yu. Argonov , S. V. Prants
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