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Persistent homology is a method for probing topological properties of point clouds and functions. The method involves tracking the birth and death of topological features (2000) as one varies a tuning parameter. Features with short…

In this work we study the topological properties of temporal hypergraphs. Hypergraphs provide a higher dimensional generalization of a graph that is capable of capturing multi-way connections. As such, they have become an integral part of…

Computational Geometry · Computer Science 2023-02-07 Audun Myers , Cliff Joslyn , Bill Kay , Emilie Purvine , Gregory Roek , Madelyn Shapiro

Persistence diagrams have been widely recognized as a compact descriptor for characterizing multiscale topological features in data. When many datasets are available, statistical features embedded in those persistence diagrams can be…

Algebraic Topology · Mathematics 2017-07-07 Ippei Obayashi , Yasuaki Hiraoka

Persistent homology is a cornerstone of topological data analysis, offering a multiscale summary of topology with robustness to nuisance transformations, such as rotations and small deformations. Persistent homology has seen broad use…

Methodology · Statistics 2025-11-19 Zitian Wu , Arkaprava Roy , Leo L. Duan

Modern representation learning increasingly relies on unsupervised and self-supervised methods trained on large-scale unlabeled data. While these approaches achieve impressive generalization across tasks and domains, evaluating embedding…

Persistent topological properties of an image serve as an additional descriptor providing an insight that might not be discovered by traditional neural networks. The existing research in this area focuses primarily on efficiently…

Computer Vision and Pattern Recognition · Computer Science 2023-03-07 Ekaterina Khramtsova , Guido Zuccon , Xi Wang , Mahsa Baktashmotlagh

We present a new method for the statistical process control of lattice structures using tools from Topological Data Analysis. Motivated by applications in additive manufacturing, such as aerospace components and biomedical implants, where…

Methodology · Statistics 2025-10-15 Yulin An , Xueqi Zhao , Enrique del Castillo

Persistent homology is a popular and useful tool for analysing finite metric spaces, revealing features that can be used to distinguish sets of unlabeled points and as input into machine learning pipelines. The famous stability theorem of…

Computational Geometry · Computer Science 2024-05-10 Philip Smith , Vitaliy Kurlin

In this study, we introduce novel methodologies designed to adapt original data in response to the dynamics of persistence diagrams along Wasserstein gradient flows. Our research focuses on the development of algorithms that translate…

Algebraic Topology · Mathematics 2024-12-06 Minghua Wang , Jinhui Xu

We introduce a new feature map for barcodes that arise in persistent homology computation. The main idea is to first realize each barcode as a path in a convenient vector space, and to then compute its path signature which takes values in…

Machine Learning · Statistics 2020-10-28 Ilya Chevyrev , Vidit Nanda , Harald Oberhauser

Through the use of examples, we explain one way in which applied topology has evolved since the birth of persistent homology in the early 2000s. The first applications of topology to data emphasized the global shape of a dataset, such as…

Algebraic Topology · Mathematics 2021-04-23 Henry Adams , Michael Moy

Topological data analysis refers to approaches for systematically and reliably computing abstract ``shapes'' of complex data sets. There are various applications of topological data analysis in life and data sciences, with growing interest…

Mesoscale and Nanoscale Physics · Physics 2023-07-26 Daniel Leykam , Dimitris G. Angelakis

Persistence diagrams offer a way to summarize topological and geometric properties latent in datasets. While several methods have been developed that utilize persistence diagrams in statistical inference, a full Bayesian treatment remains…

Methodology · Statistics 2019-08-08 Vasileios Maroulas , Farzana Nasrin , Christopher Oballe

Spatial transcriptomics studies are becoming increasingly large and commonplace, necessitating simultaneous analysis of a large number of spatially resolved variables. Correspondingly, a diverse range of methodologies have been proposed to…

Quantitative Methods · Quantitative Biology 2025-09-09 James Boyle , Gregory Hamm , Eleanor Williams , Robin JG Hartman , Magnus Soderburg , Ian Henry , Michael Casey

This short note establishes explicit and broadly applicable relationships between persistence-based distances computed locally and globally. In particular, we show that the bottleneck distance between two zigzag persistence modules…

Algebraic Topology · Mathematics 2019-03-21 Ellen Gasparovic , Maria Gommel , Emilie Purvine , Radmila Sazdanovic , Bei Wang , Yusu Wang , Lori Ziegelmeier

Persistent homology has been widely used to discover hidden topological structures in data across various applications, including music data. To apply persistent homology, a distance or metric must be defined between points in a point cloud…

Sound · Computer Science 2025-12-15 Eunwoo Heo , Byeongchan Choi , Myung ock Kim , Mai Lan Tran , Jae-Hun Jung

Recently, bipath persistent homology has been proposed as an extension of standard persistent homology, along with its visualization (bipath persistence diagram) and computational methods. In the setting of standard persistent homology, the…

Algebraic Topology · Mathematics 2025-03-04 Shunsuke Tada

We use the persistent homology method of topological data analysis and dimensional analysis techniques to study data of syntactic structures of world languages. We analyze relations between syntactic parameters in terms of dimensionality,…

Computation and Language · Computer Science 2019-03-14 Alexander Port , Taelin Karidi , Matilde Marcolli

We use methods from topological data analysis to study the topological features of certain distributions of string vacua. Topological data analysis is a multi-scale approach used to analyze the topological features of a dataset by…

High Energy Physics - Theory · Physics 2016-04-20 Michele Cirafici

The persistence theory has been employed by several authors in order to study persistence properties of dynamical systems generated by ordinary differential equations or maps across diverse disciplines. In this note, the author discusses a…

Dynamical Systems · Mathematics 2025-09-09 N. Pant
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