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To find the best lattice model representation of a given full atom protein structure is a hard computational problem. Several greedy methods have been suggested where results are usually biased and leave room for improvement. In this paper…

Computational Engineering, Finance, and Science · Computer Science 2010-05-12 Martin Mann , Alessandro Dal Palù

We consider the problem of choosing Euclidean points to maximize the sum of their weighted pairwise distances, when each point is constrained to a ball centered at the origin. We derive a dual minimization problem and show strong duality…

Data Structures and Algorithms · Computer Science 2010-07-02 Neal E. Young

This paper studies the possibility of upper bounding the position error of an estimate for range based positioning algorithms in wireless sensor networks. In this study, we argue that in certain situations when the measured distances…

Information Theory · Computer Science 2015-03-20 Mohammad Reza Gholami , Erik G. Ström , Henk Wymeersch , Mats Rydström

A central problem in liaison theory is to decide whether every arithmetically Cohen-Macaulay subscheme of projective $n$-space can be linked by a finite number of arithmetically Gorenstein schemes to a complete intersection. We show that…

Algebraic Geometry · Mathematics 2012-09-03 Juan Migliore , Uwe Nagel

Recent developments in storage -- especially in the area of resistive random access memory (ReRAM) -- are attempting to scale the storage density by regarding the information data as two-dimensional (2D), instead of one-dimensional (1D).…

Information Theory · Computer Science 2025-09-04 Viet Hai Le , Thanh Phong Pham , Tuan Thanh Nguyen , Kui Cai , Kees A. Schouhamer Immink

In this paper we develop techniques for determining the dimension of linear systems of divisors based at a collection of general fat points in P^n by partitioning the monomial basis for the vector space of global sections of O(d). The…

Algebraic Geometry · Mathematics 2012-05-09 Stepan Paul

Consider a polynomial vector field $\xi$ in $\mathbb{C}^n$ with algebraic coefficients, and $K$ a compact piece of a trajectory. Let $N(K,d)$ denote the maximal number of isolated intersections between $K$ and an algebraic hypersurface of…

Classical Analysis and ODEs · Mathematics 2017-08-03 Gal Binyamini

The basic (and traditional) crossing number problem is to determine the minimum number of crossings in a topological drawing of an input graph in the plane. We develop a unified framework yielding fixed-parameter tractable (FPT) algorithms…

Computational Geometry · Computer Science 2026-05-07 Éric Colin de Verdière , Petr Hliněný

A {\it stuck knot} is a knot diagram containing designated crossings, called {\it stuck crossings}, whose incident strands are required to remain locally non-separable. These rigidity constraints restrict the allowable ambient isotopies and…

Geometric Topology · Mathematics 2026-02-23 Ioannis Diamantis

A fertile area of recent research has demonstrated concrete polynomial time lower bounds for solving natural hard problems on restricted computational models. Among these problems are Satisfiability, Vertex Cover, Hamilton Path, Mod6-SAT,…

Computational Complexity · Computer Science 2010-02-03 Ryan Williams

In the $d$-Scattered Set problem we are asked to select at least $k$ vertices of a given graph, so that the distance between any pair is at least $d$. We study the problem's (in-)approximability and offer improvements and extensions of…

Computational Complexity · Computer Science 2019-10-15 Ioannis Katsikarelis , Michael Lampis , Vangelis Th. Paschos

This paper proposes an algorithmic framework for various reconfiguration problems using zero-suppressed binary decision diagrams (ZDDs), a data structure for families of sets. In general, a reconfiguration problem checks if there is a…

Data Structures and Algorithms · Computer Science 2022-12-19 Takehiro Ito , Jun Kawahara , Yu Nakahata , Takehide Soh , Akira Suzuki , Junichi Teruyama , Takahisa Toda

We propose new estimates for the frontier of a set of points. They are defined as kernel estimates covering all the points and whose associated support is of smallest surface. The estimates are written as linear combinatio- ns of kernel…

Methodology · Statistics 2011-03-31 Guillaume Bouchard , Stéphane Girard , Anatoli Iouditski , Alexander Nazin

Motivated by the effective bounds of ordinary differential equations, we prove an effective version of uniform bounding for partial differential fields with commuting derivations. More precisely, we provide an upper bound for the size of…

Algebraic Geometry · Mathematics 2015-10-28 James Freitag , Omar Leon Sanchez

Let $A(n, d)$ denote the maximum size of a binary code of length $n$ and minimum Hamming distance $d$. Studying $A(n, d)$, including efforts to determine it as well to derive bounds on $A(n, d)$ for large $n$'s, is one of the most…

Information Theory · Computer Science 2023-05-25 James Chin-Jen Pang , Hessam Mahdavifar , S. Sandeep Pradhan

We consider the problem of bounding CFT correlators on the Euclidean section. By reformulating the question as an optimization problem, we construct functionals numerically which determine upper and lower bounds on correlators under several…

High Energy Physics - Theory · Physics 2022-05-04 Miguel F. Paulos , Zechuan Zheng

Let \({\mathbb K}\) be any field, let \(X\subset {\mathbb P}^{k-1}\) be a set of \(n\) distinct \({\mathbb K}\)-rational points, and let \(a\geq 1\) be an integer. In this paper we find lower bounds for the minimum distance \(d(X)_a\) of…

Commutative Algebra · Mathematics 2024-04-16 John Pawlina , Stefan Tohaneanu

We develop three approaches of combinatorial flavour to study the structure of minimal codes and cutting blocking sets in finite geometry, each of which has a particular application. The first approach uses techniques from algebraic…

Combinatorics · Mathematics 2020-12-03 Gianira N. Alfarano , Martino Borello , Alessandro Neri , Alberto Ravagnani

An encoder observes a point pattern---a finite number of points in the interval $[0,T]$---which is to be described to a reconstructor using bits. Based on these bits, the reconstructor wishes to select a subset of $[0,T]$ that contains all…

Information Theory · Computer Science 2011-02-16 Amos Lapidoth , Andreas Malär , Ligong Wang

We estimate the selection constant in the following geometric selection theorem by Pach: For every positive integer $d$ there is a constant $c_d > 0$ such that whenever $X_1,..., X_{d+1}$ are $n$-element subsets of $\mathbb{R}^d$, then we…

Metric Geometry · Mathematics 2015-10-20 Roman Karasev , Jan Kynčl , Pavel Paták , Zuzana Patáková , Martin Tancer