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Propagation of transition fronts in models of coupled oscillators with non-degenerate on-site potential is usually considered in terms of travelling waves. We show that the system dynamics can be reformulated as an implicit map structure,…

Pattern Formation and Solitons · Physics 2018-08-08 I. B. Shiroky , O. V. Gendelman

We consider a 1 1/2degrees of freedom Hamiltonian dynamical system, which models the chaotic dynamics of charged test-particles in a turbulent electric field, across the confining magnetic field in controlled thermonuclear fusion devices.…

Mathematical Physics · Physics 2009-11-13 Natalia Tronko , Michel Vittot , Cristel Chandre , Philippe Ghendrih , Guido Ciraolo

This paper discusses transport barrier formation and layering as consequences of jam formation. Extensive use is made of analogies with the theory of traffic flow in one dimension. The relation of flux jamming to motility induced phase…

Plasma Physics · Physics 2025-10-17 P. H. Diamond , Y. Kosuga , P. L. Guillon , Ö. D. Gürcan

Interactions between an evolving solid and inviscid flow can result in substantial computational complexity, particularly in circumstances involving varied boundary conditions between the solid and fluid phases. Examples of such…

Fluid Dynamics · Physics 2022-09-30 Emma M. Schmidt , J. Matt Quinlan , Brandon Runnels

Turbulent plasmas notably self-organize to higher energy states upon application of additional free energy sources or modification of edge operating conditions. Mechanisms whereby such bifurcations occur have been actively debated for…

Many real-analytic flows, e.g. in chemical kinetics, share a multiple time scale spectral structure. The trajectories of the corresponding dynamical systems are observed to bundle near so-called slow invariant manifolds (SIMs), which are…

Dynamical Systems · Mathematics 2019-12-04 Jörn Dietrich , Dirk Lebiedz

Patterns in reaction-diffusion systems often contain two spatial scales; a long scale determined by a typical wavelength or domain size, and a short scale pertaining to front structures separating different domains. Such patterns naturally…

patt-sol · Physics 2009-10-22 Aric Hagberg , Ehud Meron

The migration behaviors of cancer cells are known to be heterogeneous. However, the interplay between the adhesion interactions, dynamical shape changes and fluid flows in regulating cell migration heterogeneity and plasticity during cancer…

Soft Condensed Matter · Physics 2020-01-22 Himadri S Samanta

We consider a phase-separating mixture of active and passive fluids and explore morphological asymmetries of the emerging dominantly bicontinous dynamic emulsion. Two-dimensional numerical simulations reveal that the geometric and…

Soft Condensed Matter · Physics 2026-01-22 Rainer Backofen , Axel Voigt

Reaction-diffusion equations describe various spatially extended processes that unfold as traveling fronts moving at constant velocity. We introduce and solve analytically a model that, besides such fronts, supports solutions advancing as…

Biological Physics · Physics 2026-02-13 Louis Brezin , Kyle J. Shaffer , Kirill S. Korolev

This paper investigates the dynamics of a reaction-diffusion system with two free boundaries, modeling the invasion of two cooperative species, where the free boundaries represent expanding fronts. We first analyze the long-term behavior of…

Analysis of PDEs · Mathematics 2025-11-21 Qian Qin , JinJing Jiao , Zhiguo Wang , Hua Nie

Biological systems encode function not primarily in steady states, but in the structure of transient responses elicited by time-varying stimuli. Overshoots, biphasic dynamics, adaptation kinetics, fold-change detection, entrainment, and…

Quantitative Methods · Quantitative Biology 2026-01-05 Eduardo D. Sontag

Multiphase flows are commonly found in chemical engineering processes such as distillation columns, bubble columns, fluidized beds and heat exchangers. The physical boundaries of domains in numerical simulations of multiphase flows are…

Fluid Dynamics · Physics 2023-04-21 Tanyakarn Treeratanaphitak , Nasser Mohieddin Abukhdeir

Diffusion-mediated surface phenomena are crucial for human life and industry, with examples ranging from oxygen capture by lung alveolar surface to heterogeneous catalysis, gene regulation, membrane permeation and filtration processes.…

Statistical Mechanics · Physics 2020-08-19 Denis S. Grebenkov

Self-activation coupled to a transport mechanism results in traveling waves that describe polymerization reactions, forest fires, tumor growth, and even the spread of epidemics. Diffusion is a simple and commonly used model of particle…

Statistical Mechanics · Physics 2020-07-06 Keisuke Ishihara , Ashish B. George , Ryan Cornelius , Kirill S. Korolev

We consider a stochastically perturbed reaction diffusion equation in a bounded interval, with boundary conditions imposing the two stable phases at the endpoints. We investigate the asymptotic behavior of the front separating the two…

Mathematical Physics · Physics 2016-02-11 L. Bertini , S. Brassesco , P. Buttà

Biochemical signalling cascades transduce extracellular stimuli into cellular responses through sequences of discrete, node-to-node activations. While signal fidelity depends critically on local interaction kinetics, the mechanisms…

Dynamical Systems · Mathematics 2026-04-20 Chathranee Jayathilaka , Mark B. Flegg

We consider flame front propagation in channel geometries. The steady state solution in this problem is space dependent, and therefore the linear stability analysis is described by a partial integro-differential equation with a space…

Pattern Formation and Solitons · Physics 2011-08-19 Oleg Kupervasser , Zeev Olami , Itamar Procaccia

We investigate the evolution of particle ensembles in open chaotic hydrodynamical flows. Active processes of the type A+B --> 2B and A+B --> 2C are considered in the limit of weak diffusion. As an illustrative advection dynamics we consider…

chao-dyn · Physics 2009-10-31 Gy. Karolyi , A. Pentek , Z. Toroczkai , T. Tel , C. Grebogi

We consider a two-species reaction-diffusion system in one space dimension that is derived from an epidemiological model in a spatially periodic environment with two types of pathogens: the wild type and the mutant. The system is of a…

Analysis of PDEs · Mathematics 2025-01-22 Quentin Griette , Hiroshi Matano