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Ondex is a data integration and visualization platform developed to support Systems Biology Research. At its core is a data model based on two main principles: first, all information can be represented as a graph and, second, all elements…

Artificial Intelligence · Computer Science 2010-12-09 Catherine Canevet , Artem Lysenko , Andrea Splendiani , Matthew Pocock , Christopher Rawlings

Modern information systems are changing the idea of "data processing" to the idea of "concept processing", meaning that instead of processing words, such systems process semantic concepts which carry meaning and share contexts with other…

Computation and Language · Computer Science 2018-11-09 Roger Granada , Renata Vieira , Cassia Trojahn , Nathalie Aussenac-Gilles

The development of a company often entails the emergence of autonomous data sources with different structural and technological organization. This can lead to the inability of data analysis at a high level and a violation of the integrity…

Information Retrieval · Computer Science 2022-01-14 A. Kalinin , E. Shikov , D. Vaganov , A. Lysenko

In this work, we present a novel approach to ontology reasoning that is based on deep learning rather than logic-based formal reasoning. To this end, we introduce a new model for statistical relational learning that is built upon deep…

Artificial Intelligence · Computer Science 2017-05-31 Patrick Hohenecker , Thomas Lukasiewicz

Ontology authoring is a complex process, where commonly the automated reasoner is invoked for verification of newly introduced changes, therewith amounting to a time-consuming test-last approach. Test-Driven Development (TDD) for ontology…

Artificial Intelligence · Computer Science 2018-12-17 C. Maria Keet , Kieren Davies , Agnieszka Lawrynowicz

Existing decision-theoretic reasoning frameworks such as decision networks use simple data structures and processes. However, decisions are often made based on complex data structures, such as social networks and protein sequences, and rich…

Artificial Intelligence · Computer Science 2014-07-14 Brian E. Ruttenberg , Avi Pfeffer

The ontology engineering process is complex, time-consuming, and error-prone, even for experienced ontology engineers. In this work, we investigate the potential of Large Language Models (LLMs) to provide effective OWL ontology drafts…

Ever growing number of image documents available on the Internet continuously motivates research in better annotation models and more efficient retrieval methods. Formal knowledge representation of objects and events in pictures, their…

Information Retrieval · Computer Science 2017-12-06 Marko Horvat , Anton Grbin , Gordan Gledec

One of the main current challenges in Educational Data Mining and Learning Analytics is the portability or transferability of predictive models obtained for a particular course so that they can be applied to other different courses. To…

Artificial Intelligence · Computer Science 2024-10-11 Javier Lopez Zambrano , Juan A. Lara , Cristobal Romero

We present a statistical mechanical theory of the process of annotating an object with terms selected from an ontology. The term selection process is formulated as an ideal lattice gas model, but in a highly structured inhomogeneous field.…

Physics and Society · Physics 2016-05-19 David C. Hoyle , Andrew Brass

Ontology matching is a core task when creating interoperable and linked open datasets. In this paper, we explore a novel structure-based mapping approach which is based on knowledge graph embeddings: The ontologies to be matched are…

Artificial Intelligence · Computer Science 2022-04-11 Jan Portisch , Guilherme Costa , Karolin Stefani , Katharina Kreplin , Michael Hladik , Heiko Paulheim

Even though modern service-oriented and data-oriented architectures promise to deliver loosely coupled control systems, they are inherently brittle as they commonly depend on a priori agreed interfaces and data models. At the same time, the…

Instrumentation and Methods for Astrophysics · Physics 2013-10-22 Wim Pessemier , Gert Raskin , Hans Van Winckel , Geert Deconinck , Philippe Saey

Ontologies are formal representations of concepts and complex relationships among them. They have been widely used to capture comprehensive domain knowledge in areas such as biology and medicine, where large and complex ontologies can…

Human-Computer Interaction · Computer Science 2019-10-24 Ying Yang , Michael Wybrow , Yuan-Fang Li , Tobias Czauderna , Yongqun He

Users of Institutional Repositories and Digital Libraries are known by their needs for very specific information about one or more subjects. To characterize users profiles and offer them new documents and resources is one of the main…

Digital Libraries · Computer Science 2010-05-24 Marisa R. De Giusti , Gonzalo L. Villarreal , Agustín Vosou , Juan P. Martínez

Administration of a Web directory and maintenance of its content and the associated structure is a delicate and labor intensive task performed exclusively by human domain experts. Subsequently there is an imminent risk of a directory…

Information Retrieval · Computer Science 2013-02-12 Marko Horvat , Gordan Gledec , Nikola Bogunović

Ontology alignment (a.k.a ontology matching (OM)) plays a critical role in knowledge integration. Owing to the success of machine learning in many domains, it has been applied in OM. However, the existing methods, which often adopt ad-hoc…

Artificial Intelligence · Computer Science 2022-05-05 Yuan He , Jiaoyan Chen , Denvar Antonyrajah , Ian Horrocks

Reproducibility of computational results remains a challenge in materials science, as simulation workflows and parameters are often reported only in unstructured text and tables. While literature data are valuable for validation and reuse,…

Obtaining an implementation of a data warehouse is a complex task that forces designers to acquire wide knowledge of the domain, thus requiring a high level of expertise and becoming it a prone-to-fail task. Based on our experience, we have…

Databases · Computer Science 2011-06-03 Jesús Pardillo , Jose-Norberto Mazón

Amid the recent uptake of Generative AI, sociotechnical scholars and critics have traced a multitude of resulting harms, with analyses largely focused on values and axiology (e.g., bias). While value-based analyses are crucial, we argue…

Human-Computer Interaction · Computer Science 2025-04-07 Nava Haghighi , Sunny Yu , James Landay , Daniela Rosner

Ontology-based data access is concerned with querying incomplete data sources in the presence of domain-specific knowledge provided by an ontology. A central notion in this setting is that of an ontology-mediated query, which is a database…

Databases · Computer Science 2013-06-07 Meghyn Bienvenu , Balder ten Cate , Carsten Lutz , Frank Wolter
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