English
Related papers

Related papers: Calculation of complex DNA damage induced by ions

200 papers

DNA double-strand breaks (DSBs) represent a serious source of damage for all living things and thus there have been many quantitative studies of DSBs both in vivo and in vitro. Despite this fact, the processes that lead to their production…

Biomolecules · Quantitative Biology 2015-06-05 Shunsuke F. Shimobayashi , Takafumi Iwaki , Toshiaki Mori , Kenichi Yoshikawa

Radiation damage is considered to be the major problem that still prevents imaging an individual biological molecule for structural analysis. So far, all known mapping techniques using sufficient short wave-length radiation, be it X-rays or…

Biological Physics · Physics 2010-10-28 Matthias Germann , Tatiana Latychevskaia , Conrad Escher , Hans-Werner Fink

We study the fragmentation (far forward/backward) region of heavy ion collisions by considering an at-rest nucleus which is struck by a relativistic sheet of colored glass. By means of a simple classical model, we calculate the subsequent…

High Energy Physics - Phenomenology · Physics 2021-05-05 Isobel Kolbé , Mawande Lushozi , Larry D. McLerran , Gongming Yu

We present a highly efficient molecular dynamics scheme for calculating the concentration depth profile of dopants in ion irradiated materials. The scheme incorporates several methods for reducing the computational overhead, plus a rare…

Computational Physics · Physics 2009-10-31 Keith M. Beardmore , Niels Gronbech-Jensen

DNA and proteins are chiral: their three-dimensional structure cannot be superimposed with its mirror image. Circular dichroism spectroscopy is widely used to characterize chiral compounds, but data interpretation is difficult in the case…

Biomolecules · Quantitative Biology 2020-09-09 Steven Daly , Frederic Rosu , Valerie Gabelica

An accurate control of the optical properties of single crystal diamond during microfabrication processes such as ion implantation plays a crucial role in the engineering of integrated photonic devices. In this work we present a systematic…

We study the energy deposition by light and heavy nuclei in tissue-like media as used for cancer therapy. The depth-dose distributions for protons, $^{3}$He, $^{12}$C, $^{20}$Ne, and $^{58}$Ni nuclei are calculated within a Monte Carlo…

Medical Physics · Physics 2010-11-03 Igor Pshenichnov , Igor Mishustin , Walter Greiner

How DNA repair enzymes find the relatively rare sites of damage is not known in great detail. Recent experiments and molecular data suggest that the individual repair enzymes do not work independently of each other, but rather interact with…

Biomolecules · Quantitative Biology 2007-05-23 Kasper Astrup Eriksen

This paper presents a quantitative analysis of the impact of inelastic collisions with atoms in a crystalline environment on the channeling efficiency and intensity of the channeling radiation for high-energy electrons and positrons passing…

Accelerator Physics · Physics 2025-11-24 Andrei V. Korol , Andrey V. Solov'yov

It has long been known that radiation biology plays an important role and it is necessary for radiotherapy treatments. The radiation effects on normal and malignant tissues after exposure range from a femtosecond to months and years…

Medical Physics · Physics 2017-04-24 Cyril Voyant , Daniel Julian

{\bf Purpose}: To develop a first principle and multi-scale model for normal tissue complication probability (NTCP) as a function of dose and LET for proton and in general for particle therapy with a goal of incorporating nano-scale…

Medical Physics · Physics 2020-07-01 Ramin Abolfath , Chris Peeler , Dragan Mirkovic , Radhe Mohan , David Grosshans

There are various sources of ionizing radiation exposure, where medical exposure for radiation therapy or diagnosis is the most common human-made source. Understanding how gene expression is modulated after ionizing radiation exposure and…

We used a multiscale model to study the damage caused by swift heavy ions in GaN. The model combines Monte Carlo and molecular dynamics simulations to analyze the material response to the excitation initiated by a projectile. We found that…

Materials Science · Physics 2026-02-17 S. V. Moskalets , R. A. Rymzhanov , A. E. Volkov

Changes in the medium of biological cell nucleus under ion beam action is considered as a possible cause of cell functioning disruption in the living body. As the most long-lived molecular product appeared in the cell after the passage of…

Biological Physics · Physics 2015-06-12 D. V. Piatnytskyi , O. O. Zdorevskyi , S. M. Perepelytsya , S. N. Volkov

Space solar cell radiation hardness is of fundamental importance in view of the future missions towards harsh radiation environment (like the Jupiter missions) and for the new spacecraft using Electrical Propulsion. In this paper we report…

Simulations of the generation of the atomic polarization is necessary for interpreting the second solar spectrum. For this purpose, it is important to rigorously determine the effects of the isotropic collisions with neutral hydrogen on the…

Solar and Stellar Astrophysics · Physics 2016-08-24 Moncef Derouich

Using a simple and generic molecular dynamics model, we study the damage in a disc of interacting particles as the disc fragments upon impact with a wall. The damage, defined as the ratio of the number of bonds broken by the impact to the…

Statistical Mechanics · Physics 2011-01-21 N. Sator , H. Hietala

The pattern of radiation energy deposition in substances at the microscopic level of lattice, molecule size, or the cell's nucleus is not uniform. The energy of radiation is transferred to the substance medium in the form of discrete,…

Medical Physics · Physics 2022-10-14 Elsayed K. Elmaghraby , Mohamed Bahaaeldin-Afifi

In the present work, we develop a general spatial stochastic model to describe the formation and repair of radiation-induced DNA damage. The model is described mathematically as a measure-valued particle-based stochastic system and extends…

Probability · Mathematics 2023-03-28 Francesco G. Cordoni

The investigation of solar cells degradation and the prediction of its end-of-life performance is of primary importance in the preparation of a space mission. In the present work, we investigate the reduction of solar-cells' maximum power…

Instrumentation and Methods for Astrophysics · Physics 2017-08-23 C. Baur , M. Gervasi , P. Nieminen , S. Pensotti , P. G. Rancoita , M. Tacconi