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Related papers: MONARC Simulation Framework

200 papers

We develop a modeling and simulation framework capable of massively parallel simulation of multicellular systems with spatially resolved stochastic kinetics in individual cells. By the use of operator-splitting we decouple the simulation of…

Cell Behavior · Quantitative Biology 2018-06-29 Adrien Coulier , Andreas Hellander

Distributed systems are becoming more common place, as computers typically contain multiple computation processors. The SpiNNaker architecture is such a distributed architecture, containing millions of cores connected with a unique…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-04 Andrew G. D. Rowley , Christian Brenninkmeijer , Simon Davidson , Donal Fellows , Andrew Gait , David R. Lester , Luis A. Plana , Oliver Rhodes , Alan B. Stokes , Steve B. Furber

Modeling event sequences of multiple event types with marked temporal point processes (MTPPs) provides a principled way to uncover governing dynamical rules and predict future events. Current neural network approaches to MTPP inference rely…

Machine Learning · Computer Science 2026-03-02 David Berghaus , Patrick Seifner , Kostadin Cvejoski , César Ojeda , Ramsés J. Sánchez

Modern intelligent systems researchers employ the scientific method: they form hypotheses about system behavior, and then run experiments using one or more independent variables to test their hypotheses. We present SIERRA, a novel framework…

Robotics · Computer Science 2022-03-10 John Harwell , London Lowmanstone , Maria Gini

Here we present a machine learning framework and model implementation that can learn to simulate a wide variety of challenging physical domains, involving fluids, rigid solids, and deformable materials interacting with one another. Our…

Machine Learning · Computer Science 2020-09-15 Alvaro Sanchez-Gonzalez , Jonathan Godwin , Tobias Pfaff , Rex Ying , Jure Leskovec , Peter W. Battaglia

This work considers the problem of finding analytical expressions for the expected values of dis- tributed computing performance metrics when the underlying communication network has a complex structure. Through active probing tests a real…

Adaptation and Self-Organizing Systems · Physics 2013-11-18 Francisco Prieto-Castrillo , Antonio Astillero , María Botón-Fernández

All simulation approaches eventually face limits in computational scalability when applied to large spatiotemporal domains. This challenge becomes especially apparent in molecular-level particle simulations, where high spatial and temporal…

Computational Physics · Physics 2025-10-23 Matthias Busch , Gregor Häfner , Jiayu Xie , Marius Tacke , Marcus Müller , Christian J. Cyron , Roland C. Aydin

This work introduces a novel, modular, layered web based platform for managing machine learning experiments on grid-based High Performance Computing infrastructures. The coupling of the communication services offered by the grid, with an…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-12 Chairi Kiourt , Dimitris Kalles

Deployment of network/distributed systems sets high requirements for procedures, tools and approaches for the complex testing of these systems. This work provides a survey of testing activities with regard to these systems based on…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-04-28 Andrey A. Shchurov , Radek Marik , Vladimir A. Khlevnoy

Heterogeneous computing is one of the most important computational solutions to meet rapidly increasing demands on system performance. It typically allows the main flow of applications to be executed on a CPU while the most computationally…

Software Engineering · Computer Science 2020-12-11 Hugo Andrade , Ola Benderius , Christian Berger , Ivica Crnkovic , Jan Bosch

We describe a network clustering framework, based on finite mixture models, that can be applied to discrete-valued networks with hundreds of thousands of nodes and billions of edge variables. Relative to other recent model-based clustering…

Computation · Statistics 2020-03-13 Duy Q. Vu , David R. Hunter , Michael Schweinberger

These lecture notes cover basic automata-theoretic concepts and logical formalisms for the modeling and verification of concurrent and distributed systems. Many of these concepts naturally extend the classical automata and logics over…

Logic in Computer Science · Computer Science 2021-10-19 Benedikt Bollig , Paul Gastin

Cycle-accurate software simulation of multicores with complex microarchitectures is often excruciatingly slow. People use simplified core models to gain simulation speed. However, a persistent question is to what extent the results derived…

Hardware Architecture · Computer Science 2016-10-10 Sizhuo Zhang , Andrew Wright , Daniel Sanchez , Arvind

Dynamic Scene Graphs (DSGs) provide a structured representation of hierarchical, interconnected environments, but current approaches struggle to capture stochastic dynamics, partial observability, and multi-agent activity. These aspects are…

Robotics · Computer Science 2025-10-13 Lars Ohnemus , Nils Hantke , Max Weißer , Kai Furmans

Coupled models are set to become increasingly important in all aspects of science and engineering as tools with which to study complex systems in an integrated manner. Such coupled, hybrid simulations typically communicate data between the…

Computational Physics · Physics 2009-11-11 P. V. Coveney , G. De Fabritiis , M. J. Harvey , S. M. Pickles , A. R. Porter

Many complex mechatronic systems consist of multiple interconnected dynamical subsystems, which are designed, developed, analyzed, and manufactured by multiple independent teams. To support such a design approach, a modular model framework…

Systems and Control · Electrical Eng. & Systems 2024-02-13 Robert A. Egelmeers , Lars A. L. Janssen , Rob H. B. Fey , Jasper Gerritsen , Nathan van de Wouw

We present an integrated microsimulation framework to estimate the pedestrian movement over time and space with limited data on directional counts. Using the activity-based approach, simulation can compute the overall demand and trajectory…

Optimization and Control · Mathematics 2017-02-10 Alexis Pibrac , Bilal Farooq

In recent years, machine learning has been adopted to complex networks, but most existing works concern about the structural properties. To use machine learning to detect phase transitions and accurately identify the critical transition…

Physics and Society · Physics 2020-01-08 Qi Ni , Ming Tang , Ying Liu , Ying-Cheng Lai

Monte Carlo simulations play a crucial role in all stages of particle collider experiments. There has been a long-term trend in HEP of both increasing collision energies and the luminosity. As a result, the requirements for MC simulations…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-27 Felix Hoffmann , Udo Kebschull

Simulating the transient effects occurring in superconducting accelerator magnet circuits requires including the mutual electro-thermo-dynamic interaction among the circuit elements, such as power converters, magnets, and protection…