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The adaptive evolution of large asexual populations is generally characterized by competition between clones carrying different beneficial mutations. This interference phenomenon slows down the adaptation speed and makes the theoretical…

Populations and Evolution · Quantitative Biology 2012-12-20 Maria Rita Fumagalli , Matteo Osella , Philippe Thomen , Francois Heslot , Marco Cosentino Lagomarsino

Large sets of genotypes give rise to the same phenotype because phenotypic expression is highly redundant. Accordingly, a population can accept mutations without altering its phenotype, as long as thegenotype mutates into another one on the…

Populations and Evolution · Quantitative Biology 2015-02-18 Susanna Manrubia , José A. Cuesta

The influence of migration on the stochastic dynamics of subdivided populations is still an open issue in various evolutionary models. We develop here a self-consistent mean-field-like method in order to determine the effects of migration…

Statistical Mechanics · Physics 2014-04-10 Pierangelo Lombardo , Andrea Gambassi , Luca Dall'Asta

Evolutionary models for populations of constant size are frequently studied using the Moran model, the Wright-Fisher model, or their diffusion limits. When evolution is neutral, a random genealogy given through Kingman's coalescent is used…

Populations and Evolution · Quantitative Biology 2012-07-31 Peter Pfaffelhuber , Benedikt Vogt

Discrete ancestral problems arising in population genetics are investigated. In the neutral case, the duality concept has proved of particular interest in the understanding of backward in time ancestral process from the forward in time…

Probability · Mathematics 2008-11-07 Thierry Huillet

Building ethical machines may involve bestowing upon them the emotional capacity to self-evaluate and repent on their actions. While apologies represent potential strategic interactions, the explicit evolution of guilt as a behavioural…

Multiagent Systems · Computer Science 2025-05-13 Theodor Cimpeanu , Luis Moniz Pereira , The Anh Han

We investigate the $\Lambda$-Seed-Bank-Wright-Fisher process, a model describing allele frequency dynamics in populations exhibiting both skewed offspring distributions and dormancy. By performing a change of measure, we condition this…

Evolutionary game theory has been a successful tool to combine classical game theory with learning-dynamical descriptions in multiagent systems. Provided some symmetric structures of interacting players, many studies have been focused on…

Artificial Intelligence · Computer Science 2022-06-23 Xinyu Zhang , Peng Peng , Yushan Zhou , Haifeng Wang , Wenxin Li

We study a model of a branching process subject to selection, modeled by giving each family an individual fitness acting as a branching rate, and mutation, modeled by resampling the fitness of a proportion of offspring in each generation.…

Probability · Mathematics 2025-02-21 Su-Chan Park , Joachim Krug , Peter Mörters

We discuss a new optimization strategy, which considerably improves the effectivity of evolutionary algorithms applied to a certain class of optimization problems. The basic principle is to solve first a simpler related problem, which is…

Disordered Systems and Neural Networks · Physics 2007-05-23 Volkhard Buchholtz , Thorsten Poeschel

We study a class of evolution models, where the breeding process involves an arbitrary exchangeable process, allowing for mutations to appear. The population size $n$ is fixed, hence after breeding, selection is applied. Individuals are…

Probability · Mathematics 2022-05-03 Daniela Bertacchi , Juri Lember , Fabio Zucca

In distributed evolutionary algorithms, migration interval is used to decide migration moments. Nevertheless, migration moments predetermined by intervals cannot match the dynamic situation of evolution. In this paper, a scheme of setting…

Neural and Evolutionary Computing · Computer Science 2017-01-06 Chengjun Li , Jia Wu

In this paper we present a new modelling framework combining replicator dynamics (which is the standard model of frequency dependent selection) with the model of an age-structured population. The new framework allows for the modelling of…

Populations and Evolution · Quantitative Biology 2021-04-01 Krzysztof Argasinski , Mark Broom

In this paper we study a two-level branching model for virus populations under cell division. We assume that the cells are carrying virus populations which evolve as a branching particle system with competition, while the cells split…

Probability · Mathematics 2020-12-09 Luis Osorio , Anita Winter

Moran or Wright-Fisher processes are probably the most well known model to study the evolution of a population under various effects. Our object of study will be the Simpson index which measures the level of diversity of the population, one…

Probability · Mathematics 2018-09-25 Arnaud Personne , Arnaud Guillin , Franck Jabot , Arnaud Guillin

We define a general class of models representing natural selection between two alleles. The population size and spatial structure are arbitrary, but fixed. Genetics can be haploid, diploid, or otherwise; reproduction can be asexual or…

Populations and Evolution · Quantitative Biology 2021-02-05 Benjamin Allen , Alex McAvoy

A central premise in evolutionary biology is that individual variation can generate information asymmetries that facilitate the emergence of hierarchical organisation. To examine this process, we develop an agent-based model (ABM) to…

Multiagent Systems · Computer Science 2026-05-06 Shanshan Mao , Peter Tino

Evolutionary systems must learn to generalize, often extrapolating from a limited set of selective conditions to anticipate future environmental changes. The mechanisms enabling such generalization remain poorly understood, despite their…

Populations and Evolution · Quantitative Biology 2025-10-29 Federica Ferretti , Mehran Kardar , Arvind Murugan

Evolutionary game theory is a mathematical approach to studying how social behaviors evolve. In many recent works, evolutionary competition between strategies is modeled as a stochastic process in a finite population. In this context, two…

Populations and Evolution · Quantitative Biology 2017-08-16 Christine Sample , Benjamin Allen

Individual species may experience diverse outcomes, from prosperity to extinction, in an ecological community subject to external and internal variations. Despite the wealth of theoretical results derived from random matrix ensembles, a…

Populations and Evolution · Quantitative Biology 2024-06-12 Andrus Giraldo , Deok-Sun Lee
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