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The geometry of closed surfaces equipped with a Euclidean metric with finitely many conical points of arbitrary angle is studied. The main result is that the image of a non-closed geodesic has 0 distance from the set of conical points.…

Geometric Topology · Mathematics 2016-03-08 Charalampos Charitos , Ioannis Papadoperakis , Georgios Tsapogas

Diffusion magnetic resonance imaging (dMRI) data allow to reconstruct the 3D pathways of axons within the white matter of the brain as a tractography. The analysis of tractographies has drawn attention from the machine learning and pattern…

Machine Learning · Statistics 2015-04-03 Emanuele Olivetti , Thien Bao Nguyen , Paolo Avesani

Today's typical application of geometric morphometrics to a quantitative comparison of organismal anatomies begins by standardizing samples of homologously labelled point configurations for location, orientation, and scale, and then renders…

Computer Vision and Pattern Recognition · Computer Science 2023-01-16 Fred L. Bookstein

Single-cell omics enable the profiles of cells, which contain large numbers of biological features, to be quantified. Cluster analysis, a dimensionality reduction process, is used to reduce the dimensions of the data to make it…

Genomics · Quantitative Biology 2024-06-06 Okezue Bell , Arthur Lee , Elizabeth Engle

The Fr\'echet distance is a computational mainstay for comparing polygonal curves. The Fr\'echet distance under translation, which is a translation invariant version, considers the similarity of two curves independent of their location in…

Computational Geometry · Computer Science 2025-01-23 Lotte Blank , Jacobus Conradi , Anne Driemel , Benedikt Kolbe , André Nusser , Marena Richter

The computation of the elastic shape registration of two simple surfaces in 3-dimensional space and therefore of the elastic shape distance between them has been investigated by Kurtek, Jermyn, et al. who have proposed algorithms to carry…

Differential Geometry · Mathematics 2024-09-27 Javier Bernal , Jim Lawrence

We propose a novel iterative process to establish the minimum separation between two ellipsoids. The method maintains one point on each surface and updates their locations in the theta-phi parametric space. The tension along the connecting…

Computational Geometry · Computer Science 2026-03-25 Dariush Amirkhani , Junfeng Zhang

Spatial approximations have been traditionally used in spatial databases to accelerate the processing of complex geometric operations. However, approximations are typically only used in a first filtering step to determine a set of candidate…

Finding correspondences between 3D shapes is a crucial problem in computer vision and graphics, which is for example relevant for tasks like shape interpolation, pose transfer, or texture transfer. An often neglected but essential property…

Computer Vision and Pattern Recognition · Computer Science 2023-09-12 Viktoria Ehm , Paul Roetzer , Marvin Eisenberger , Maolin Gao , Florian Bernard , Daniel Cremers

Accurate surface geometry representation is crucial in 3D visual computing. Explicit representations, such as polygonal meshes, and implicit representations, like signed distance functions, each have distinct advantages, making efficient…

Graphics · Computer Science 2025-09-26 Christian Stippel , Felix Mujkanovic , Thomas Leimkühler , Pedro Hermosilla

A time series is a sequence of data items; typical examples are videos, stock ticker data, or streams of temperature measurements. Quite some research has been devoted to comparing and indexing simple time series, i.e., time series where…

Computational Complexity · Computer Science 2018-06-04 Jörg P. Bachmann , Johann-Christoph Freytag , Benjamin Hauskeller , Nicole Schweikardt

We study the problem of how well a tree metric is able to preserve the sum of pairwise distances of an arbitrary metric. This problem is closely related to low-stretch metric embeddings and is interesting by its own flavor from the line of…

Data Structures and Algorithms · Computer Science 2013-01-16 Mong-Jen Kao , Der-Tsai Lee , Dorothea Wagner

The Hausdorff distance (HD) is a robust measure of set dissimilarity, but computing it exactly on large, high-dimensional datasets is prohibitively expensive. We propose \textbf{ProHD}, a projection-guided approximation algorithm that…

Information Retrieval · Computer Science 2025-11-25 Jiuzhou Fu , Luanzheng Guo , Nathan R. Tallent , Dongfang Zhao

Distance measures play an important role in shape classification and data analysis problems. Topological distances based on Reeb graphs and persistence diagrams have been employed to obtain effective algorithms in shape matching and scalar…

Machine Learning · Computer Science 2023-03-07 Yashwanth Ramamurthi , Amit Chattopadhyay

Deep neural representations of 3D shapes as implicit functions have been shown to produce high fidelity models surpassing the resolution-memory trade-off faced by the explicit representations using meshes and point clouds. However, most…

Computer Vision and Pattern Recognition · Computer Science 2021-06-16 Rahul Venkatesh , Tejan Karmali , Sarthak Sharma , Aurobrata Ghosh , R. Venkatesh Babu , László A. Jeni , Maneesh Singh

Porous structures are intricate solid materials with numerous small pores, extensively used in fields like medicine, chemical engineering, and aerospace. However, the design of such structures using computer-aided tools is a time-consuming…

Graphics · Computer Science 2024-02-20 Gao Depeng , Gao Yang , Lin Hongwei

We study the shortcut Fr\'{e}chet distance, a natural variant of the Fr\'{e}chet distance, that allows us to take shortcuts from and to any point along one of the curves. The classic Fr\'echet distance is a bottle-neck distance measure and…

Computational Geometry · Computer Science 2013-12-05 Maike Buchin , Anne Driemel , Bettina Speckmann

In this paper, we study stable constant mean curvature $H$ surfaces in $\R^3$. We prove that, in such a surface, the distance from a point to the boundary is less that $\pi/(2H)$. This upper-bound is optimal and is extended to stable…

Differential Geometry · Mathematics 2008-09-29 Laurent Mazet

Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár

Sphericity and roundness are fundamental measures used for assessing object uniformity in 2D and 3D images. However, using their strict definition makes computation costly. As both 2D and 3D microscopy imaging datasets grow larger, there is…

Computer Vision and Pattern Recognition · Computer Science 2026-04-03 Pawel Tomasz Pieta , Peter Winkel Rasumssen , Anders Bjorholm Dahl , Anders Nymark Christensen