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Web archives, query and proxy logs, and so on, can all be very large and highly repetitive; and are accessed only sporadically and partially, rather than continually and holistically. This type of data is ideal for compression-based…

Information Theory · Computer Science 2016-03-01 Matthias Petri , Alistair Moffat , P. C. Nagesh , Anthony Wirth

We present a simple adaptation of the Lempel Ziv 78' (LZ78) compression scheme ({\em IEEE Transactions on Information Theory, 1978}) that supports efficient random access to the input string. Namely, given query access to the compressed…

Data Structures and Algorithms · Computer Science 2013-01-14 Akashnil Dutta , Reut Levi , Dana Ron , Ronitt Rubinfeld

The Lempel--Ziv 78 (LZ78) factorization is a well-studied technique for data compression. It and its derivatives are used in compression formats such as "compress" or "gif". Although most research focuses on the factorization of plain data,…

Data Structures and Algorithms · Computer Science 2025-12-22 Hiroki Shibata , Dominik Köppl

Relative Lempel-Ziv (RLZ) is a popular algorithm for compressing databases of genomes from individuals of the same species when fast random access is desired. With Kuruppu et al.'s (SPIRE 2010) original implementation, a reference genome is…

Data Structures and Algorithms · Computer Science 2016-05-17 Anthony J. Cox , Andrea Farruggia , Travis Gagie , Simon J. Puglisi , Jouni Sirén

Relative Lempel-Ziv (RLZ) parsing is a dictionary compression method in which a string $S$ is compressed relative to a second string $R$ (called the reference) by parsing $S$ into a sequence of substrings that occur in $R$. RLZ is…

Data Structures and Algorithms · Computer Science 2022-08-25 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

Domains like bioinformatics, version control systems, collaborative editing systems (wiki), and others, are producing huge data collections that are very repetitive. That is, there are few differences between the elements of the collection.…

Data Structures and Algorithms · Computer Science 2011-12-21 Sebastian Kreft , Gonzalo Navarro

Indexing highly repetitive collections has become a relevant problem with the emergence of large repositories of versioned documents, among other applications. These collections may reach huge sizes, but are formed mostly of documents that…

Information Retrieval · Computer Science 2016-05-25 Francisco Claude , Antonio Fariña , Miguel A. Martínez-Prieto , Gonzalo Navarro

We show how to compress string dictionaries using the Lempel-Ziv (LZ78) data compression algorithm. Our approach is validated experimentally on dictionaries of up to 1.5 GB of uncompressed text. We achieve compression ratios often…

Data Structures and Algorithms · Computer Science 2013-05-06 Julian Arz , Johannes Fischer

At the present scenario of the internet, there exist many optimization techniques to improve the Web speed but almost expensive in terms of bandwidth. So after a long investigation on different techniques to compress the data without any…

Information Theory · Computer Science 2014-05-20 Hemant Kumar Saini , Satpal Singh Kushwaha , C. Rama Krishna

Lempel-Ziv (LZ77 or, briefly, LZ) is one of the most effective and widely-used compressors for repetitive texts. However, the existing efficient methods computing the exact LZ parsing have to use linear or close to linear space to index the…

Data Structures and Algorithms · Computer Science 2020-05-12 Dmitry Kosolobov , Daniel Valenzuela , Gonzalo Navarro , Simon J. Puglisi

Advances in DNA sequencing technology will soon result in databases of thousands of genomes. Within a species, individuals' genomes are almost exact copies of each other; e.g., any two human genomes are 99.9% the same. Relative Lempel-Ziv…

Data Structures and Algorithms · Computer Science 2011-11-08 Travis Gagie , Juha Kärkkäinen , Yakov Nekrich , Simon J. Puglisi

Technology progress in DNA sequencing boosts the genomic database growth at faster and faster rate. Compression, accompanied with random access capabilities, is the key to maintain those huge amounts of data. In this paper we present an…

Computational Engineering, Finance, and Science · Computer Science 2011-03-14 Szymon Grabowski , Sebastian Deorowicz

Grammar-based compression is a popular and powerful approach to compressing repetitive texts but until recently its relatively poor time-space trade-offs during real-life construction made it impractical for truly massive datasets such as…

Data Structures and Algorithms · Computer Science 2020-07-21 Travis Gagie , Tomohiro I , Giovanni Manzini , Gonzalo Navarro , Hiroshi Sakamoto , Louisa Seelbach Benkner , Yoshimasa Takabatake

The well-known dictionary-based algorithms of the Lempel-Ziv (LZ) 77 family are the basis of several universal lossless compression techniques. These algorithms are asymmetric regarding encoding/decoding time and memory requirements, with…

Data Structures and Algorithms · Computer Science 2009-12-31 Artur Ferreira , Arlindo Oliveira , Mario Figueiredo

Simple and fast decoding is one of the main advantages of LZ77-type text encoding used in many popular file compressors such as gzip and 7zip. With the recent introduction of external memory algorithms for Lempel-Ziv factorization there is…

Data Structures and Algorithms · Computer Science 2020-12-11 Djamal Belazzougui , Juha Kärkkäinen , Dominik Kempa , Simon J. Puglisi

For decades, computing the LZ factorization (or LZ77 parsing) of a string has been a requisite and computationally intensive step in many diverse applications, including text indexing and data compression. Many algorithms for LZ77 parsing…

Data Structures and Algorithms · Computer Science 2020-12-11 Juha Kärkkäinen , Dominik Kempa , Simon J. Puglisi

We raise the question of approximating the compressibility of a string with respect to a fixed compression scheme, in sublinear time. We study this question in detail for two popular lossless compression schemes: run-length encoding (RLE)…

Data Structures and Algorithms · Computer Science 2007-06-11 Sofya Raskhodnikova , Dana Ron , Ronitt Rubinfeld , Adam Smith

A well-known fact in the field of lossless text compression is that high-order entropy is a weak model when the input contains long repetitions. Motivated by this, decades of research have generated myriads of so-called dictionary…

Data Structures and Algorithms · Computer Science 2020-12-17 Dominik Kempa , Nicola Prezza

Data compression continues to evolve, with traditional information theory methods being widely used for compressing text, images, and videos. Recently, there has been growing interest in leveraging Generative AI for predictive compression…

Information Theory · Computer Science 2024-09-24 Swathi Shree Narashiman , Nitin Chandrachoodan

The compression-complexity trade-off of lossy compression algorithms that are based on a random codebook or a random database is examined. Motivated, in part, by recent results of Gupta-Verd\'{u}-Weissman (GVW) and their underlying…

Information Theory · Computer Science 2009-04-23 Chris Gioran , Ioannis Kontoyiannis
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