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Binary trees are fundamental objects in models of evolutionary biology and population genetics. Here, we discuss some of their combinatorial and structural properties as they depend on the tree class considered. Furthermore, the process by…

Populations and Evolution · Quantitative Biology 2021-06-30 Thomas Wiehe

We propose a model-based clustering algorithm for a general class of functional data for which the components could be curves or images. The random functional data realizations could be measured with error at discrete, and possibly random,…

Machine Learning · Statistics 2022-03-14 Steven Golovkine , Nicolas Klutchnikoff , Valentin Patilea

The problem of how to estimate diffusion on a graph effectively is of importance both theoretically and practically. In this paper, we make use of two widely studied indices, geodesic distance and mean first-passage time ($MFPT$) for random…

Combinatorics · Mathematics 2019-10-17 Fei Ma , Xiaomin Wang , Ping Wang

We introduce Joint Probability Trees (JPT), a novel approach that makes learning of and reasoning about joint probability distributions tractable for practical applications. JPTs support both symbolic and subsymbolic variables in a single…

Machine Learning · Computer Science 2023-02-15 Daniel Nyga , Mareike Picklum , Tom Schierenbeck , Michael Beetz

Bayesian Decision Trees are known for their probabilistic interpretability. However, their construction can sometimes be costly. In this article we present a general Bayesian Decision Tree algorithm applicable to both regression and…

Machine Learning · Statistics 2020-09-23 Giuseppe Nuti , Lluís Antoni Jiménez Rugama , Andreea-Ingrid Cross

It has always been a great challenge for clustering algorithms to automatically determine the cluster numbers according to the distribution of datasets. Several approaches have been proposed to address this issue, including the recent…

Machine Learning · Computer Science 2013-06-14 Xuhui Fan , Yiling Zeng , Longbing Cao

We introduce the microclustering Ewens--Pitman model for random partitions, obtained by scaling the strength parameter of the Ewens--Pitman model linearly with the sample size. The resulting random partition is shown to have the…

Methodology · Statistics 2025-07-25 Mario Beraha , Stefano Favaro

Point-based representations have consistently played a vital role in geometric data structures. Most point cloud learning and processing methods typically leverage the unordered and unconstrained nature to represent the underlying geometry…

Computer Vision and Pattern Recognition · Computer Science 2025-07-28 Jionghao Wang , Cheng Lin , Yuan Liu , Rui Xu , Zhiyang Dou , Xiao-Xiao Long , Hao-Xiang Guo , Taku Komura , Wenping Wang , Xin Li

The paper presents an iterative version of join-tree clustering that applies the message passing of join-tree clustering algorithm to join-graphs rather than to join-trees, iteratively. It is inspired by the success of Pearl's belief…

Artificial Intelligence · Computer Science 2013-01-07 Rina Dechter , Kalev Kask , Robert Mateescu

Dynamic trees are mixtures of tree structured belief networks. They solve some of the problems of fixed tree networks at the cost of making exact inference intractable. For this reason approximate methods such as sampling or mean field…

Machine Learning · Computer Science 2013-01-18 Amos J. Storkey

Various modifications of decision trees have been extensively used during the past years due to their high efficiency and interpretability. Tree node splitting based on relevant feature selection is a key step of decision tree learning, at…

Machine Learning · Computer Science 2017-09-05 Dmitry Ignatov , Andrey Ignatov

We present a novel probabilistic clustering model for objects that are represented via pairwise distances and observed at different time points. The proposed method utilizes the information given by adjacent time points to find the…

Machine Learning · Computer Science 2015-04-16 Julia E. Vogt , Marius Kloft , Stefan Stark , Sudhir S. Raman , Sandhya Prabhakaran , Volker Roth , Gunnar Rätsch

Joint distributions over many variables are frequently modeled by decomposing them into products of simpler, lower-dimensional conditional distributions, such as in sparsely connected Bayesian networks. However, automatically learning such…

Machine Learning · Computer Science 2013-01-07 Scott Davies , Andrew Moore

Biclustering algorithms partition data and covariates simultaneously, providing new insights in several domains, such as analyzing gene expression to discover new biological functions. This paper develops a new model-free biclustering…

Methodology · Statistics 2022-08-09 Marcos Matabuena , J. C Vidal , Oscar Hernan Madrid Padilla , Dino Sejdinovic

The problem of selecting a small, yet high quality subset of patterns from a larger collection of itemsets has recently attracted lot of research. Here we discuss an approach to this problem using the notion of decomposable families of…

Machine Learning · Computer Science 2020-06-18 Nikolaj Tatti , Hannes Heikinheimo

Recent advances in Neural Machine Translation (NMT) show that adding syntactic information to NMT systems can improve the quality of their translations. Most existing work utilizes some specific types of linguistically-inspired tree…

Computation and Language · Computer Science 2018-08-29 Xinyi Wang , Hieu Pham , Pengcheng Yin , Graham Neubig

We would like to congratulate Lee, Nadler and Wasserman on their contribution to clustering and data reduction methods for high $p$ and low $n$ situations. A composite of clustering and traditional principal components analysis, treelets is…

Applications · Statistics 2008-07-28 Catherine Tuglus , Mark J. van der Laan

Random discrete distributions, say $F,$ known as species sampling models, represent a rich class of models for classification and clustering, in Bayesian statistics and machine learning. They also arise in various areas of probability and…

Statistics Theory · Mathematics 2019-08-21 Lanelot F. James

An unsupervised classification method for point events occurring on a network of lines is proposed. The idea relies on the distributional flexibility and practicality of random partition models to discover the clustering structure featuring…

Neuronal dendrites form densely branched tree architectures through which mitochondria must be distributed to supply the cell's energetic needs. Dendritic mitochondria circulate through the tree, undergoing fusion and fission to form…

Biological Physics · Physics 2024-05-09 Mario Hidalgo-Soria , Elena F. Koslover
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