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I analyse a model of an evolving network represented as a directed graph; each node corresponds to one molecular species and the links to catalytic interactions between species. Over short timescales the graph remains fixed while relative…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Sandeep Krishna

Bootstrap percolation on the random graph $G_{n,p}$ is a process of spread of "activation" on a given realization of the graph with a given number of initially active nodes. At each step those vertices which have not been active but have at…

Probability · Mathematics 2012-10-22 Svante Janson , Tomasz Łuczak , Tatyana Turova , Thomas Vallier

Bootstrap percolation on an arbitrary graph has a random initial configuration, where each vertex is occupied with probability p, independently of each other, and a deterministic spreading rule with a fixed parameter k: if a vacant site has…

Probability · Mathematics 2008-04-26 Jozsef Balogh , Yuval Peres , Gabor Pete

We consider homological edge percolation on a sequence $(\mathcal{G}_t)_t$ of finite graphs covered by an infinite (quasi)transitive graph $\mathcal{H}$, and weakly convergent to $\mathcal{H}$. Namely, we use the covering maps to classify…

Mathematical Physics · Physics 2024-06-19 Michael Woolls , Leonid Pryadko

We study a model for coupled networks introduced recently by Buldyrev et al., Nature 464, 1025 (2010), where each node has to be connected to others via two types of links to be viable. Removing a critical fraction of nodes leads to a…

Data Analysis, Statistics and Probability · Physics 2015-05-30 Seung-Woo Son , Peter Grassberger , Maya Paczuski

By bootstrap percolation we mean the following deterministic process on a graph $G$. Given a set $A$ of vertices "infected" at time 0, new vertices are subsequently infected, at each time step, if they have at least $r\in\mathbb{N}$…

Combinatorics · Mathematics 2009-08-31 József Balogh , Béla Bollobás , Robert Morris

We offer a solution to a long-standing problem in the physics of networks, the creation of a plausible, solvable model of a network that displays clustering or transitivity -- the propensity for two neighbors of a network node also to be…

Statistical Mechanics · Physics 2009-08-13 M. E. J. Newman

Can evolving networks be inferred and modeled without directly observing their nodes and edges? In many applications, the edges of a dynamic network might not be observed, but one can observe the dynamics of stochastic cascading processes…

Machine Learning · Computer Science 2019-02-26 Elahe Ghalebi , Baharan Mirzasoleiman , Radu Grosu , Jure Leskovec

We study the spreading dynamics on graphs with a power law degree distribution p_k ~ k^-gamma with 2<gamma<3, as an example of a branching process with diverging reproductive number. We provide evidence that the divergence of the second…

Disordered Systems and Neural Networks · Physics 2009-11-11 Alexei Vazquez

Percolation is the simplest fundamental model in statistical mechanics that exhibits phase transitions signaled by the emergence of a giant connected component. Despite its very simple rules, percolation theory has successfully been applied…

Statistical Mechanics · Physics 2015-06-09 Abbas Ali Saberi

We define a dynamic model of random networks, where new vertices are connected to old ones with a probability proportional to a sublinear function of their degree. We first give a strong limit law for the empirical degree distribution, and…

Probability · Mathematics 2008-07-31 Steffen Dereich , Peter Morters

We consider robustness and percolation properties of the networks of networks, in which random nodes in different individual networks (layers) can be interdependent. We explore the emergence of the giant mutually connected component,…

Disordered Systems and Neural Networks · Physics 2014-11-18 Ginestra Bianconi , Sergey N. Dorogovtsev

Social networks have become an inseparable part of human life and processing them in an efficient manner is a top priority in the study of networks. These networks are highly dynamic and they are growing incessantly. Inspired by the concept…

Social and Information Networks · Computer Science 2020-12-04 Sara Ahmadian , Shahrzad Haddadan

Hybrid percolation transitions (HPTs) induced by cascading processes have been observed in diverse complex systems such as $k$-core percolation, breakdown on interdependent networks and cooperative epidemic spreading models. Much effort has…

Physics and Society · Physics 2017-08-16 Deokjae Lee , Wonjun Choi , J. Kertész , B. Kahng

In $r$-neighbor bootstrap percolation on the vertex set of a graph $G$, a set $A$ of initially infected vertices spreads by infecting, at each time step, all uninfected vertices with at least $r$ previously infected neighbors. When the…

Combinatorics · Mathematics 2019-10-09 Andrew J. Uzzell

The bootstrap percolation (or threshold model) is a dynamic process modelling the propagation of an epidemic on a graph, where inactive vertices become active if their number of active neighbours reach some threshold. We study an…

Disordered Systems and Neural Networks · Physics 2015-01-19 Alberto Guggiola , Guilhem Semerjian

Accessibility percolation is a new type of percolation problem inspired by evolutionary biology. To each vertex of a graph a random number is assigned and a path through the graph is called accessible if all numbers along the path are in…

Statistical Mechanics · Physics 2013-04-04 Stefan Nowak , Joachim Krug

We consider general continuum percolation models obeying sparseness, translation invariance, and spatial decorrelation. In particular, this includes models constructed on general point sets other than the standard Poisson point process or…

Probability · Mathematics 2026-05-13 Emmanuel Jacob , Benedikt Jahnel , Lukas Lüchtrath

In their seminal paper introducing the theory of random graphs, Erd\H{o}s and R\'{e}nyi considered the evolution of the structure of a random subgraph of $K_n$ as the density increases from $0$ to $1$, identifying two key points in this…

Combinatorics · Mathematics 2026-03-05 Maurício Collares , Joseph Doolittle , Joshua Erde

Research shows that gene duplication followed by either repurposing or removal of duplicated genes is an important contributor to evolution of gene and protein interaction networks. We aim to identify which characteristics of a network can…

Molecular Networks · Quantitative Biology 2021-07-27 Peter Crawford-Kahrl , Robert R. Nerem , Bree Cummins , Tomas Gedeon
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