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Large, pretrained language models infer powerful representations that encode rich semantic and syntactic content, albeit implicitly. In this work we introduce a novel neural language model that enforces, via inductive biases, explicit…

Computation and Language · Computer Science 2023-05-29 Ramsés J. Sánchez , Lukas Conrads , Pascal Welke , Kostadin Cvejoski , César Ojeda

Exponential random graph models (ERGMs) are a widely used framework for network data, enabling hypothesis testing on the structural mechanisms underlying observed networks. Bayesian ERGMs provide principled uncertainty quantification and…

Methodology · Statistics 2026-05-26 Alberto Caimo , Isabella Gollini

We investigate a new structure for machine learning classifiers applied to problems in high-energy physics by expanding the inputs to include not only measured features but also physics parameters. The physics parameters represent a…

High Energy Physics - Experiment · Physics 2016-05-25 Pierre Baldi , Kyle Cranmer , Taylor Faucett , Peter Sadowski , Daniel Whiteson

Recent years have seen a rapid expansion of the model space explored in statistical phylogenetics, emphasizing the need for new approaches to statistical model representation and software development. Clear communication and representation…

Populations and Evolution · Quantitative Biology 2013-12-10 Sebastian Höhna , Tracy A. Heath , Bastien Boussau , Michael J. Landis , Fredrik Ronquist , John P. Huelsenbeck

The main contribution of the present paper is the introduction of a simple yet expressive hybrid-dynamic logic for describing quantum programs. This version of quantum logic can express quantum measurements and unitary evolutions of states…

Logic in Computer Science · Computer Science 2024-06-05 Daniel Gaina

A new methodology for model determination in decomposable graphical Gaussian models is developed. The Bayesian paradigm is used and, for each given graph, a hyper inverse Wishart prior distribution on the covariance matrix is considered.…

Computation · Statistics 2015-03-13 Sophie Donnet , Jean-Michel Marin

Learning with hidden variables is a central challenge in probabilistic graphical models that has important implications for many real-life problems. The classical approach is using the Expectation Maximization (EM) algorithm. This…

Machine Learning · Computer Science 2012-12-12 Gal Elidan , Nir Friedman

Combining symbolic human knowledge with neural networks provides a rule-based ante-hoc explanation of the output. In this paper, we propose feature extracting functions for integrating human knowledge abstracted as logic rules into the…

Artificial Intelligence · Computer Science 2021-04-13 Shashank Gupta , Antonio Robles-Kelly , Mohamed Reda Bouadjenek

There are numerous applications where we have to deal with temporal uncertainty associated with events. The Temporal Probabilistic (TP) Logic Programs should provide support for valid-time indeterminacy of events, by proposing the concept…

Logic in Computer Science · Computer Science 2011-03-08 Zoran Majkic

A fundamental computation for statistical inference and accurate decision-making is to compute the marginal probabilities or most probable states of task-relevant variables. Probabilistic graphical models can efficiently represent the…

Machine Learning · Computer Science 2019-06-28 KiJung Yoon , Renjie Liao , Yuwen Xiong , Lisa Zhang , Ethan Fetaya , Raquel Urtasun , Richard Zemel , Xaq Pitkow

Learning low-dimensional embeddings of knowledge graphs is a powerful approach used to predict unobserved or missing edges between entities. However, an open challenge in this area is developing techniques that can go beyond simple edge…

Social and Information Networks · Computer Science 2019-10-30 William L. Hamilton , Payal Bajaj , Marinka Zitnik , Dan Jurafsky , Jure Leskovec

Neural network design has utilized flexible nonlinear processes which can mimic biological systems, but has suffered from a lack of traceability in the resulting network. Graphical probabilistic models ground network design in probabilistic…

Machine Learning · Computer Science 2015-06-19 Kenric P. Nelson , Madalina Barbu , Brian J. Scannell

In this paper, we aim to develop a large language model (LLM) with the reasoning ability on complex graph data. Currently, LLMs have achieved very impressive performance on various natural language learning tasks, extensions of which have…

Artificial Intelligence · Computer Science 2023-05-12 Jiawei Zhang

Several machine learning methods aim to learn or reason about complex physical systems. A common first-step towards reasoning is to infer system parameters from observations of its behavior. In this paper, we investigate the performance of…

Computation and Language · Computer Science 2024-02-07 Sean Memery , Mirella Lapata , Kartic Subr

Techniques for plan recognition under uncertainty require a stochastic model of the plan-generation process. We introduce Probabilistic State-Dependent Grammars (PSDGs) to represent an agent's plan-generation process. The PSDG language…

Artificial Intelligence · Computer Science 2013-01-18 David V. Pynadath , Michael P. Wellman

Likelihood based-learning of graphical models faces challenges of computational-complexity and robustness to model mis-specification. This paper studies methods that fit parameters directly to maximize a measure of the accuracy of predicted…

Machine Learning · Computer Science 2014-07-04 Justin Domke

Hidden Markov Models (HMMs) and Probabilistic Context-Free Grammars (PCFGs) are widely used structured models, both of which can be represented as factor graph grammars (FGGs), a powerful formalism capable of describing a wide range of…

Computation and Language · Computer Science 2022-05-03 Songlin Yang , Wei Liu , Kewei Tu

EM algorithm is a convenient tool for maximum likelihood model fitting when the data are incomplete or when there are latent variables or hidden states. In this review article we explain that EM algorithm is a natural computational scheme…

Methodology · Statistics 2011-04-13 Zhangzhang Si , Haifeng Gong , Song-Chun Zhu , Ying Nian Wu

Parametric linear systems are linear systems of equations in which some symbolic parameters, that is, symbols that are not considered to be candidates for elimination or solution in the course of analyzing the problem, appear in the…

Rings and Algebras · Mathematics 2025-09-01 Robert M. Corless , Mark Giesbrecht , Leili Rafiee Sevyeri , B. David Saunders

We describe a representation and a set of inference methods that combine logic programming techniques with probabilistic network representations for uncertainty (influence diagrams). The techniques emphasize the dynamic construction and…

Artificial Intelligence · Computer Science 2013-04-11 John S. Breese , Edison Tse
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