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"Computational experiments" use code and interactive visualizations to convey mathematical and physical concepts in an intuitive way, and are increasingly used to support ex cathedra lecturing in scientific and engineering disciplines.…

Automated debugging, long pursued in a variety of fields from software engineering to cybersecurity, requires a framework that offers the building blocks for a programmable debugging workflow. However, existing debuggers are primarily…

Software Engineering · Computer Science 2025-06-06 Gabriele Digregorio , Roberto Alessandro Bertolini , Francesco Panebianco , Mario Polino

The potential power provided and possibilities presented by computation graphs has steered most of the available modeling techniques to re-implementing, utilization and including the complex nature of System Biology (SB). To model the…

Multiagent Systems · Computer Science 2019-09-05 Ghazal Tashakor , Remo Suppi

PyGSTi is a Python software package for assessing and characterizing the performance of quantum computing processors. It can be used as a standalone application, or as a library, to perform a wide variety of quantum characterization,…

Artificial Intelligence (AI) can solve complex scientific problems beyond human capabilities, but the resulting solutions offer little insight into the underlying physical principles. One prominent example is quantum physics, where…

Quantum Physics · Physics 2026-02-27 Sören Arlt , Haonan Duan , Felix Li , Sang Michael Xie , Yuhuai Wu , Mario Krenn

This study introduces Pedophysics, an open-source Python package designed to facilitate solutions for users who work in the field of soil assessment using near-surface geophysical electromagnetic techniques. At the core of this software is…

Geophysics · Physics 2024-03-13 Gaston Mendoza Veirana , Philippe De Smedt , Jeroen Verhegge , Wim Cornelis

Fully automated astronomical data calibration and imaging pipelines are difficult to develop without a good prototyping method which permits to bridge the time between observatory commissioning and the moment when the special features and…

Instrumentation and Methods for Astrophysics · Physics 2021-12-21 Dirk Petry

In this script handbook, we collect the basic (and partially upgraded) PHP scripts used for building the AMIDAS website (http://pisrv0.pit.physik.uni-tuebingen.de/darkmatter/amidas/), an online interactive simulation/data analysis system…

Instrumentation and Detectors · Physics 2014-03-26 Chung-Lin Shan

An early-stage version of simulation package is developed for electronic structure calculation and dynamics of atom process in large-scale systems, particularly, nm-scale or 10nm-scale systems. We adopted the Extensible Markup Language…

Materials Science · Physics 2007-11-02 Hitoshi Nitta , Naoki Watanabe , Takeo Hoshi , Takeo Fujiwara

This paper contains a brief discussion of the Application Development Environment (ADE) that is used to build database applications involving the graphical user interface (GUI). ADE computing separates the database access and the user…

Logic in Computer Science · Computer Science 2007-05-23 Larissa Ismailova , Konstantin Zinchenko

We present the first language-model-driven agentic artificial intelligence (AI) system to autonomously execute multi-stage physics experiments on a production synchrotron light source. Implemented at the Advanced Light Source particle…

Accelerator Physics · Physics 2026-04-28 Thorsten Hellert , Drew Bertwistle , Simon C. Leemann , Antonin Sulc , Marco Venturini

Numerical simulations of Einstein's field equations provide unique insights into the physics of compact objects moving at relativistic speeds, and which are driven by strong gravitational interactions. Numerical relativity has played a key…

General Relativity and Quantum Cosmology · Physics 2018-07-09 Daniel Johnson , E. A. Huerta , Roland Haas

We present a Python extension to the massively parallel HPC simulation toolkit waLBerla. waLBerla is a framework for stencil based algorithms operating on block-structured grids, with the main application field being fluid simulations in…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-11-24 Martin Bauer , Florian Schornbaum , Christian Godenschwager , Matthias Markl , Daniela Anderl , Harald Köstler , Ulrich Rüde

Mayavi is an open-source, general-purpose, 3D scientific visualization package. It seeks to provide easy and interactive tools for data visualization that fit with the scientific user's workflow. For this purpose, Mayavi provides several…

Software Engineering · Computer Science 2011-03-14 Prabhu Ramachandran , Gaël Varoquaux

We present celmech, an open-source Python package designed to facilitate a wide variety of celestial mechanics calculations. The package allows users to formulate and integrate equations of motion incorporating user-specified terms from the…

Earth and Planetary Astrophysics · Physics 2022-10-26 Sam Hadden , Daniel Tamayo

A Java software framework allows modules written in different languages to be used in a high level Object-Oriented (OO) environment. Java Native Interfaces (JNI) for Linear Collider (LC) physics event generators are used in defining a…

Computational Physics · Physics 2007-05-23 Michael T. Ronan

The rapid growth in scale and complexity of both computational and observational astrophysics over the past decade necessitates efficient and intuitive methods for examining and visualizing large datasets. Here we discuss some newly…

Instrumentation and Methods for Astrophysics · Physics 2017-04-26 J. P. Naiman , Kalina Borkiewicz , A. J. Christensen

Automatic differentiation represents a paradigm shift in scientific programming, where evaluating both functions and their derivatives is required for most applications. By removing the need to explicitly derive expressions for gradients,…

Chemical Physics · Physics 2022-06-29 Muhammad F. Kasim , Susi Lehtola , Sam M. Vinko

Quantum computing is an emerging paradigm that opens a new era for exponential computational speedup. Still, quantum computers have yet to be ready for commercial use. However, it is essential to train and qualify today the workforce that…

Quantum Physics · Physics 2022-10-28 Evandro C. R. da Rosa , Claudio Lima

Physics-informed neural network (PINN) has recently gained increasing interest in computational mechanics. In this work, we present a detailed introduction to programming PINN-based computational solid mechanics. Besides, two prevailingly…

Computational Engineering, Finance, and Science · Computer Science 2023-04-11 Jinshuai Bai , Hyogu Jeong , C. P. Batuwatta-Gamage , Shusheng Xiao , Qingxia Wang , C. M. Rathnayaka , Laith Alzubaidi , Gui-Rong Liu , Yuantong Gu
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