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We introduce a graph generating model aimed at representing the evolution of protein interaction networks. The model is based on the hypotesis of evolution by duplications and divergence of the genes which produce proteins. The obtained…

Statistical Mechanics · Physics 2007-05-23 A. Vazquez , A. Flammini , A. Maritan , A. Vespignani

Charret et. al. applied the properties of the Grassmann generators to develop a new method to calculate the coefficients of the high temperature expansion of the grand canonical partition function of self-interacting fermionic models in any…

High Energy Physics - Theory · Physics 2016-09-06 S. M. de Souza , O. Rojas Santos , M. T. Thomaz

A general explicit form for generating functions for approximating fractional derivatives is derived. To achieve this, an equivalent characterisation for consistency and order of approximations established on a general generating function…

Numerical Analysis · Mathematics 2021-05-31 W. A. Gunarathna , H. M. Nasir , W. B. Daundasekera

We study how to numerically simulate quantum fermions out of thermal equilibrium, in the context of electroweak baryogenesis. We find that by combining the lattice implementation of Aarts and Smit [1] with the "low cost" fermions of…

High Energy Physics - Phenomenology · Physics 2015-05-28 Paul M. Saffin , Anders Tranberg

We present a probabilistic generative model and efficient algorithm to model reciprocity in directed networks. Unlike other methods that address this problem such as exponential random graphs, it assigns latent variables as community…

Social and Information Networks · Computer Science 2022-09-07 Hadiseh Safdari , Martina Contisciani , Caterina De Bacco

We compare the structures and methods in the theory of causal fermion systems with approaches to fundamental physics based on division algebras, in particular the octonions. We find that octonions and, more generally, tensor products of…

This is a study of $q$-Fermions arising from a q-deformed algebra of harmonic oscillators. Two distinct algebras will be investigated. Employing the first algebra, the Fock states are constructed for the generalized Fermions obeying Pauli…

Quantum Physics · Physics 2015-06-26 P. Narayana Swamy

We propose a systematic method to produce potentially good recursive towers over finite fields. The graph point of view, so as some magma and sage computations are used in this process. We also establish some theoretical functional…

Number Theory · Mathematics 2015-03-24 Emmanuel Hallouin , Marc Perret

There are two approaches to computing the one-point functions for sine-Gordon model in infinite volume. One is a bootstrap type procedure based on the reflection relations. Another uses the fermionic basis which was originally found for the…

High Energy Physics - Theory · Physics 2015-06-15 S. Negro , F. Smirnov

Recurrence networks are a novel tool of nonlinear time series analysis allowing the characterisation of higher-order geometric properties of complex dynamical systems based on recurrences in phase space, which are a fundamental concept in…

Chaotic Dynamics · Physics 2016-04-07 Y. Zou , J. Heitzig , R. V. Donner , J. F. Donges , J. D. Farmer , R. Meucci , S. Euzzor , N. Marwan , J. Kurths

We obtain first order linear partial differential equations which are satisfied by exponential generating functions of two variables for the number of connected bipartite graphs with given Betti number. By solving these equations…

Combinatorics · Mathematics 2023-05-16 Taro Hasui , Tomoyuki Shirai , Satoshi Yabuoku

Based on the standard many-fermion field theory, the authors construct models describing ultracold fermions in a 1D optical lattices by implementing a mode expansion of the fermionic field operator where modes, in addition to space…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 Francesco Massel , Vittorio Penna

We present numerical methods to solve the Generalized Hartree-Fock theory for fermionic systems in lattices, both in thermal equilibrium and out of equilibrium. Specifically, we show how to determine the covariance matrix corresponding to…

Quantum Physics · Physics 2013-04-10 Christina V. Kraus , J. Ignacio Cirac

Since Fermions are based on anti-commutation relations, their entanglement can not be studied in the usual way, such that the available theory has to be modified appropriately. Recent publications consider in particular the structure of…

Quantum Physics · Physics 2008-12-04 M. Keyl

Response functions are a fundamental aspect of physics; they represent the link between experimental observations and the underlying quantum many-body state. However, this link is often under-appreciated, as the Lehmann formalism for…

Quantum Physics · Physics 2023-02-22 Efekan Kökcü , Heba A. Labib , J. K. Freericks , Alexander F. Kemper

It is shown that the theory of causal fermion systems gives rise to a novel mechanism of baryogenesis. This mechanism is worked out computationally in globally hyperbolic spacetimes in a way which enables the quantitative study in concrete…

General Relativity and Quantum Cosmology · Physics 2023-09-12 Felix Finster , Maximilian Jokel , Claudio F. Paganini

Chiral fermions can (presumably) be constructed by introducing two regulators, one for the gauge fields (e.g. a lattice), and another for the fermion functional integrals in a fixed (regulated) gauge field. This talk discusses cutoff…

High Energy Physics - Lattice · Physics 2009-10-28 Andreas S. Kronfeld

Using a theorem of partial differential equations, we present a general way of deriving the conserved quantities associated with a given classical point mechanical system, denoted by its Hamiltonian. Some simple examples are given to…

Classical Physics · Physics 2007-05-23 Paulus C. Tjiang , Sylvia H. Sutanto

This paper presents a novel method for analytical derivations of marginal densities using the fractional derivatives of moment-generating functions. Although the method requires likelihood functions to take specific forms, its assumptions…

Methodology · Statistics 2026-04-06 Si-Yang Li , David A. van Dyk , Maximilian Autenrieth

The parquet equation is an exact field-theoretic equation known since the 60s that underlies numerous approximations to solve strongly correlated Fermion systems. Its derivation previously relied on combinatorial arguments classifying all…

Strongly Correlated Electrons · Physics 2023-11-29 Christian J. Eckhardt , Patrick Kappl , Anna Kauch , Karsten Held