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Related papers: A modular synthetic device to calibrate promoters

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The diffusive arrival of transcription factors at the promoter sites on the DNA sets a lower bound on how accurately a cell can regulate its protein levels. Using results from the literature on diffusion-influenced reactions, we derive an…

Molecular Networks · Quantitative Biology 2014-10-24 Joris Paijmans , Pieter Rein ten Wolde

From the background of microwave-optomechanical experiments involving carbon nanotubes, the optimization of superconducting coplanar waveguide resonator devices is discussed. Two devices, one with unmodified geometry compared to previous…

Applied Physics · Physics 2024-10-02 N. Kellner , N. Hüttner , M. Will , P. Hakonen , A. K. Hüttel

Collaborative robotic industrial cells are workspaces where robots collaborate with human operators. In this context, safety is paramount, and for that a complete perception of the space where the collaborative robot is inserted is…

Robotics · Computer Science 2022-10-20 Daniela Rato , Miguel Oliveira , Vítor Santos , Manuel Gomes , Angel Sappa

Consistent distillation methods have evolved into effective techniques that significantly accelerate the sampling process of diffusion models. Although existing methods have achieved remarkable results, the selection of target timesteps…

Computer Vision and Pattern Recognition · Computer Science 2025-09-17 Qi Wang , Shuliang Zhu , Jinjia Zhou

Synthetic biology sets out to implement new functions in cells, and to develop a deeper understanding of biological design principles. In 2000, Elowitz and Leibler showed that by rational design of the reaction network, and using existing…

Biological Physics · Physics 2017-05-17 Joris Paijmans , David K Lubensky , Pieter Rein ten Wolde

Generating a novel and optimized molecule with desired chemical properties is an essential part of the drug discovery process. Failure to meet one of the required properties can frequently lead to failure in a clinical test which is costly.…

Machine Learning · Computer Science 2020-10-28 Bonggun Shin , Sungsoo Park , JinYeong Bak , Joyce C. Ho

Model compression is vital to the deployment of deep learning on edge devices. Low precision representations, achieved via quantization of weights and activations, can reduce inference time and memory requirements. However, quantifying and…

Machine Learning · Computer Science 2022-10-18 Ben Zandonati , Adrian Alan Pol , Maurizio Pierini , Olya Sirkin , Tal Kopetz

Generative molecular optimization aims to design molecules with properties surpassing those of existing compounds. However, such candidates are rare and expensive to evaluate, yielding sample efficiency essential. Additionally, surrogate…

The quantification of controllability and observability has recently received new interest in the context of large, complex networks of dynamical systems. A fundamental but computationally difficult problem is the placement or selection of…

Optimization and Control · Mathematics 2016-11-15 Fabrizio L. Cortesi , Tyler H. Summers , John Lygeros

In synthetic biology, gene regulatory circuits are often constructed by combining smaller circuit components. Connections between components are achieved by transcription factors acting on promoters. If the individual components behave as…

Molecular Networks · Quantitative Biology 2011-02-15 Kyung Hyuk Kim , Herbert M. Sauro

Calibration is crucial for ensuring the performance of phased array since amplitude-phase imbalance between elements results in significant performance degradation. While amplitude-only calibration methods offer advantages when phase…

Signal Processing · Electrical Eng. & Systems 2025-04-24 Shiyuan Li , Yuyue Zhou , Chi Zhang , Liang Kong , Kebin Liu , Yihan Xie , Chong He

The stochastic mutual repressor model is analysed using perturbation methods. This simple model of a gene circuit consists of two genes and three promotor states. Either of the two protein products can dimerize, forming a repressor molecule…

Biological Physics · Physics 2014-06-12 Jay Newby

Existing generative models, such as diffusion and auto-regressive networks, are inherently static, relying on a fixed set of pretrained parameters to handle all inputs. In contrast, humans flexibly adapt their internal generative…

Computer Vision and Pattern Recognition · Computer Science 2026-03-31 Minh-Tuan Tran , Xuan-May Le , Quan Hung Tran , Mehrtash Harandi , Dinh Phung , Trung Le

Research on the co-optimization of soft robotic design and control requires rapid means for real-world validation. Existing creation pipelines do not allow for the swift prototyping of soft robots to quickly test various design…

Robotics · Computer Science 2022-02-02 Yu Zhang , Robert K. Katzschmann

Bolometric experiments searching for rare events usually require an extremely low radioactive background to prevent spurious signals from mimicking those of interest, spoiling the sensitivity of the apparatus. In such contexts, radioactive…

Instrumentation and Detectors · Physics 2018-03-28 P. Carniti , L. Cassina , A. Giachero , C. Gotti , G. Pessina

We introduce a learning-based algorithm to obtain a measurement matrix for compressive sensing related recovery problems. The focus lies on matrices with a constant modulus constraint which typically represent a network of analog phase…

Signal Processing · Electrical Eng. & Systems 2021-10-15 Michael Koller , Wolfgang Utschick

We have designed and fabricated superconducting coplanar waveguide resonators with fundamental frequencies from 2 to $9 \rm{GHz}$ and loaded quality factors ranging from a few hundreds to a several hundred thousands reached at temperatures…

Superconductivity · Physics 2008-12-16 M. Göppl , A. Fragner , M. Baur , R. Bianchetti , S. Filipp , J. M. Fink , P. J. Leek , G. Puebla , L. Steffen , A. Wallraff

A key step in many perceptual decision tasks is the integration of sensory inputs over time, but fundamental questions remain about how this is accomplished in neural circuits. One possibility is to balance decay modes of membranes and…

Neurons and Cognition · Quantitative Biology 2011-11-29 Nicholas Cain , Andrea K. Barreiro , Michael Shadlen , Eric Shea-Brown

Discrimination and calibration represent two important properties of survival analysis, with the former assessing the model's ability to accurately rank subjects and the latter evaluating the alignment of predicted outcomes with actual…

Machine Learning · Computer Science 2024-06-04 Shi-ang Qi , Yakun Yu , Russell Greiner

Compressive sensing has been receiving a great deal of interest from researchers in many areas because of its ability in speeding up data acquisition. This framework allows fast signal acquisition and compression when signals are sparse in…

Information Theory · Computer Science 2020-03-17 Fatima Salahdine , Elias Ghribi , Naima Kaabouch
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