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The possible role of quantum effects in transfer of genetic information is studied. It's argued that the nucleotides selection during DNA replication is performed by means of proton tunneling between nucleotide and DNA-polimerase bound by…

Other Quantitative Biology · Quantitative Biology 2007-05-23 S. Mayburov , C. Nicolini , V. Sivozhelezov

One of the most important topics in molecular biology is the genetic stability of DNA. One threat to this stability is proton transfer along the hydrogen bonds of DNA that could lead to tautomerisation, hence creating point mutations. We…

Biological Physics · Physics 2021-10-04 Louie Slocombe , Marco Sacchi , Jim Al-Khalili

Positions of protons in DNA hydrogen bonds are fundamental for the fidelity of the replication process. Because the hydrogen bond is partially covalent the electronic structure of DNA plays an important role in the replication process.…

Strongly Correlated Electrons · Physics 2007-05-23 Chun-Min Chang , A. H. Castro Neto , A. R. Bishop

Novel experimental and computational studies have uncovered the proton momentum distribution in hydrogen bonded systems. In this work, we utilize recently developed open path integral Car-Parrinello molecular dynamics methodology in order…

Statistical Mechanics · Physics 2015-05-13 Joseph A. Morrone , Lin Lin , Roberto Car

The quantum motions of hydrogen (H) atoms play an important role in the dynamical properties and functionalities of condensed phase materials as well as biological systems. In this work, based on the transfer matrix method and…

Materials Science · Physics 2021-01-26 Cheng Bi , Yong Yang

In the framework of a quasi-molecular approach, the formation of hydrogen atom in the pre-recombination period of evolution of the universe is analysed quantitatively. Calculations in an adiabatic multi-level representation enable estimates…

Atomic Physics · Physics 2020-12-02 Tamaz Kereselidze , Irakli Noselidze , John F. Ogilvie

The adsorption and diffusion of hydrogen atoms on Cu(001) are studied using first-principles calculations. By taking into account the contribution of zero-point energy (ZPE), the originally identical barriers are shown to be different for H…

Mesoscale and Nanoscale Physics · Physics 2023-06-09 Xiaofan Yu , Yangwu Tong , Yong Yang

The nuclear quantum effects of hydrogen play a significant role in determining the phase stability of water ice. Hydrogen-bond symmetrization occurs as hydrogen atoms tunnel in a double-well potential, ultimately occupying the midpoint…

Materials Science · Physics 2025-11-06 Qi Zhang , Lei Wang

Neutron Compton Scattering measurements presented here of the momentum distribution of hydrogen in water at temperatures slightly below freezing to the supercritical phase show a dramatic change in the distribution as the hydrogen bond…

Condensed Matter · Physics 2007-05-23 G. Reiter , T. Abdul-Redah , J. C. LI , J. Mayers , P. Platzman

Hydrogen bonds play a pivotal role in chemistry, biology, and condensed-matter physics, where quantum tunnelling can strongly influence structure and dynamics. Isotope substitution (H $\rightarrow$ D) provides a sensitive probe of such…

Chemical Physics · Physics 2025-11-05 Krishna Kingkar Pathak

The probability distributions for bending angles in double helical DNA obtained in all-atom molecular dynamics simulations are compared with theoretical predictions. The computed distributions remarkably agree with the worm-like chain…

Biomolecules · Quantitative Biology 2009-11-13 Alexey K. Mazur

A rigorous QED theory of the multiphoton decay of excited states in hydrogen atom is presented. The "two-photon" approximation is formulated which is limited by the one-photon and two-photon transitions including cascades transitions with…

Atomic Physics · Physics 2011-11-29 D. Solovyev , L. Labzowsky

We study the dynamical behaviour of the proton transfer in the hydrogen bonds in the base-pairs of the double helices of the DNA type. Under the assumption that the elastic and the tunnelling degrees of freedom may be coupled, we derive a…

Soft Condensed Matter · Physics 2009-11-07 V. L. Golo , E. I. Kats , M. Peyrard

We present a quantum theory of a magneto-optical trap (MOT) from first principles based on the quantum kinetic equation for the atomic density matrix with taking into account the recoil effects caused by the interaction of atoms with the…

Atomic Physics · Physics 2025-07-11 O. N. Prudnikov , A. V. Taichenachev , V. I. Yudin , L. Zhou , M. S. Zhan

The nuclear tunneling crossover temperature ($T_c$) of hydrogen transfer reactions in supported molecular-switch architectures can lie close to room temperature. This calls for the inclusion of nuclear quantum effects (NQE) in the…

Chemical Physics · Physics 2020-11-25 Yair Litman , Mariana Rossi

Protons in the gap between base pairs of the double helix store the code of life by breaking the chiral symmetry that swaps the sense strand with its complementary partner. When these hydrogen bonds break during replication and…

Biological Physics · Physics 2023-08-15 Noah Bray-Ali

An understanding of hydrogen diffusion on metal surfaces is important, not just for its role in heterogeneous catalysis and hydrogen fuel cell technology, but also because it provides model systems where tunneling can be studied under…

Chemical Physics · Physics 2014-04-30 Eliza M. McIntosh , K. Thor Wikfeldt , John Ellis , Angelos Michaelides , William Allison

We study the tautomeric transitions in base pairs of DNA considering elastic properties of DNA as classical and tunneling of protons as quantum, and show that the dynamics of the transitions admits of soliton like solutions whose shape and…

Soft Condensed Matter · Physics 2007-05-23 V. L. Golo , Yu. S. Volkov

Density-functional theory calculations are performed to investigate hydrogen transport in the proton conductor BaSnO$_3$. Structural optimizations in the stable and saddle point configurations for transfer and reorientation allow…

Materials Science · Physics 2014-11-13 Grégory Geneste , Alistar Ottochian , Jessica Hermet , Guilhem Dezanneau

Hydrogen recombination is one of the most important atomic processes in many astrophysical objects such as Type II supernova (SN~II) atmospheres, the high redshift universe during the cosmological recombination era, and H II regions in the…

Solar and Stellar Astrophysics · Physics 2015-05-18 Soma De , E. Baron , Peter H. Hauschildt
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