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Causal models in statistics are often described using acyclic directed mixed graphs (ADMGs), which contain directed and bidirected edges and no directed cycles. This article surveys various interpretations of ADMGs, discusses their…

Statistics Theory · Mathematics 2025-03-28 Qingyuan Zhao

Graphical Markov models combine conditional independence constraints with graphical representations of stepwise data generating processes.The models started to be formulated about 40 years ago and vigorous development is ongoing.…

Methodology · Statistics 2015-10-12 Nanny Wermuth

Acyclic directed mixed graphs, also known as semi-Markov models represent the conditional independence structure induced on an observed margin by a DAG model with latent variables. In this paper we present a factorization criterion for…

Artificial Intelligence · Computer Science 2014-06-27 Thomas S. Richardson

We investigate probabilistic graphical models that allow for both cycles and latent variables. For this we introduce directed graphs with hyperedges (HEDGes), generalizing and combining both marginalized directed acyclic graphs (mDAGs) that…

Statistics Theory · Mathematics 2017-10-25 Patrick Forré , Joris M. Mooij

"Mixed Data" comprising a large number of heterogeneous variables (e.g. count, binary, continuous, skewed continuous, among other data types) are prevalent in varied areas such as genomics and proteomics, imaging genetics, national…

Statistics Theory · Mathematics 2014-11-04 Eunho Yang , Pradeep Ravikumar , Genevera I. Allen , Yulia Baker , Ying-Wooi Wan , Zhandong Liu

We review some not well known results about marginal log-linear models, derive some new ones and show how they might be relevant in mediation analysis within logistic regression. In particular, we elaborate on the relation between…

Methodology · Statistics 2022-04-20 Antonio Forcina

Directed acyclic graph (DAG) models, also called Bayesian networks, impose conditional independence constraints on a multivariate probability distribution, and are widely used in probabilistic reasoning, machine learning and causal…

Statistics Theory · Mathematics 2022-12-20 Robin J. Evans

We extend the log-mean linear parameterization introduced by Roverato et al. (2013) for binary data to discrete variables with arbitrary number of levels, and show that also in this case it can be used to parameterize bi-directed graph…

Methodology · Statistics 2013-09-13 Alberto Roverato

Graphical Markov models use graphs, either undirected, directed, or mixed, to represent possible dependences among statistical variables. Applications of undirected graphs (UDGs) include models for spatial dependence and image analysis,…

Artificial Intelligence · Computer Science 2013-02-18 Steen A. Andersson , David Madigan , Michael D. Perlman

Two popular approaches for relating correlated measurements of a non-Gaussian response variable to a set of predictors are to fit a marginal model using generalized estimating equations and to fit a generalized linear mixed model by…

Methodology · Statistics 2017-02-23 Jeffrey J. Gory , Peter F. Craigmile , Steven N. MacEachern

We introduce graphical time series models for the analysis of dynamic relationships among variables in multivariate time series. The modelling approach is based on the notion of strong Granger causality and can be applied to time series…

Statistics Theory · Mathematics 2011-07-18 Michael Eichler

We develop the theory linking 'E-separation' in directed mixed graphs (DMGs) with conditional independence relations among coordinate processes in stochastic differential equations (SDEs), where causal relationships are determined by "which…

Machine Learning · Computer Science 2025-03-14 Georg Manten , Cecilia Casolo , Søren Wengel Mogensen , Niki Kilbertus

We consider Markov logic networks and relational logistic regression as two fundamental representation formalisms in statistical relational artificial intelligence that use weighted formulas in their specification. However, Markov logic…

Artificial Intelligence · Computer Science 2024-05-17 Felix Weitkämper

Log-linear models are the popular workhorses of analyzing contingency tables. A log-linear parameterization of an interaction model can be more expressive than a direct parameterization based on probabilities, leading to a powerful way of…

Machine Learning · Statistics 2015-08-06 Henrik Nyman , Johan Pensar , Timo Koski , Jukka Corander

Symmetric independence relations are often studied using graphical representations. Ancestral graphs or acyclic directed mixed graphs with $m$-separation provide classes of symmetric graphical independence models that are closed under…

Statistics Theory · Mathematics 2020-09-14 Søren Wengel Mogensen , Niels Richard Hansen

Linear mixed models (LMMs) are used as an important tool in the data analysis of repeated measures and longitudinal studies. The most common form of LMMs utilize a normal distribution to model the random effects. Such assumptions can often…

Methodology · Statistics 2016-02-16 Hien D. Nguyen , Geoffrey J. McLachlan

Markov networks are popular models for discrete multivariate systems where the dependence structure of the variables is specified by an undirected graph. To allow for more expressive dependence structures, several generalizations of Markov…

Methodology · Statistics 2021-03-30 Johan Pensar , Henrik Nyman , Jukka Corander

This paper considers nonlinear dynamic models where the main parameter of interest is a nonnegative matrix characterizing the network (contagion) effects. This network matrix is usually constrained either by assuming a limited number of…

Econometrics · Economics 2022-11-23 Christian Gourieroux , Joann Jasiak

We extend Andersson-Madigan-Perlman chain graphs by (i) relaxing the semidirected acyclity constraint so that only directed cycles are forbidden, and (ii) allowing up to two edges between any pair of nodes. We introduce global, and ordered…

Machine Learning · Statistics 2016-02-22 Jose M. Peña

Directed acyclic graph (DAG) models have become widely studied and applied in statistics and machine learning -- indeed, their simplicity facilitates efficient procedures for learning and inference. Unfortunately, these models are not…

Machine Learning · Statistics 2022-07-20 Bryan Andrews , Gregory F. Cooper , Thomas S. Richardson , Peter Spirtes