Related papers: Counting Irreducible Double Occurrence Words
A double occurrence word (DOW) is a word in which every symbol appears exactly twice; two DOWs are equivalent if one is a symbol-to-symbol image of the other. We consider the so called repeat pattern ($\alpha\alpha$) and the return pattern…
In combinatorics on words, a word $w$ over an alphabet $\Sigma$ is said to avoid a pattern $p$ over an alphabet $\Delta$ of variables if there is no factor $f$ of $w$ such that $f=h(p)$ where $h:\Delta^*\to\Sigma^*$ is a non-erasing…
In combinatorics on words, a word $w$ over an alphabet $\Sigma$ is said to avoid a pattern $p$ over an alphabet $\Delta$ if there is no factor $f$ of $w$ such that $f=h(p)$ where $h:\Delta^*\to\Sigma^*$ is a non-erasing morphism. A pattern…
Partial words are sequences over a finite alphabet that may contain wildcard symbols, called holes, which match or are compatible with all letters; partial words without holes are said to be full words (or simply words). Given an infinite…
Word $W$ is said to encounter word $V$ provided there is a homomorphism $\phi$ mapping letters to nonempty words so that $\phi(V)$ is a substring of $W$. For example, taking $\phi$ such that $\phi(h)=c$ and $\phi(u)=ien$, we see that…
Frobenius observed that the number of times an element of a finite group is obtained as a commutator is given by a specific combination of the irreducible characters of the group. More generally, for any word w the number of times an…
Enumerating the number of times one word occurs in another is a much-studied combinatorial subject. By utilizing a method that we call ``lexicographic extreme referencing'', we provide a formula for computing occurrences of one binary word…
The binomial notation (w u) represents the number of occurrences of the word u as a (scattered) subword in w. We first introduce and study possible uses of a geometrical interpretation of (w ab) and (w ba) when a and b are distinct letters.…
Rich words are characterized by containing the maximum possible number of distinct palindromes. Several characteristic properties of rich words have been studied; yet the analysis of repetitions in rich words still involves some interesting…
In combinatorics on words, a word $w$ over an alphabet $\Sigma$ is said to avoid a pattern $p$ over an alphabet $\Delta$ if there is no factor $f$ of $w$ such that $f=h(p)$ where $h:\Delta^*\to\Sigma^*$ is a non-erasing morphism. A pattern…
In the present paper we consider biologically motivated reduction operations on double occurrence words. Then we define the nesting index of a double occurrence word to be the least number of reduction operations it takes for a word to be…
Given a countable set X (usually taken to be N or Z), an infinite permutation $\pi$ of X is a linear ordering $<_\pi$ of X. This paper investigates the combinatorial complexity of infinite permutations on N associated with the image of…
For an arbitrary word $w$ on an alphabet, we can define the alternating symbol graph, $G(w)$, as the graph in which the edge $(a, b)$ is in $E$ iff the letters $a$ and $b$ alternate in the word $w$. A graph $G = (V, E)$ is said to be…
In this article, we count the number of return words in some infinite words with complexity 2n+1. We also consider some infinite words given by codings of rotation and interval exchange transformations on k intervals. We prove that the…
Given a countable set X (usually taken to be the natural numbers or integers), an infinite permutation, \pi, of X is a linear ordering of X. This paper investigates the combinatorial complexity of infinite permutations on the natural…
We consider the infinite one-sided sequence generated by the period-doubling substitution $\sigma(a,b)=(ab,aa)$, denoted by $\mathbb{D}$. Since $\mathbb{D}$ is uniformly recurrent, each factor $\omega$ appears infinite many times in the…
Hairpin completion is an abstract operation modeling a DNA bio-operation which receives as input a DNA strand $w = x\alpha y \calpha$, and outputs $w' = x \alpha y \bar{\alpha} \bar{x}$, where $\bar{x}$ denotes the Watson-Crick complement…
An overlap-free (or $\beta$-free) word $w$ over a fixed alphabet $\Sigma$ is extremal if every word obtained from $w$ by inserting a single letter from $\Sigma$ at any position contains an overlap (or a factor of exponent at least $\beta$,…
We consider the number of occurrences of subwords (non-consecutive sub-sequences) in a given word. We first define the notion of subword entropy of a given word that measures the maximal number of occurrences among all possible subwords. We…
The avoidability, or unavoidability of patterns in words over finite alphabets has been studied extensively. A word (pattern) over a finite set is said to be unavoidable if, for all but finitely many words, there exists a morphism mapping…