English
Related papers

Related papers: Removing System Noise from Comparative Genomic Hyb…

200 papers

We develop a data-driven approach for signal denoising that utilizes variational mode decomposition (VMD) algorithm and Cramer Von Misses (CVM) statistic. In comparison with the classical empirical mode decomposition (EMD), VMD enjoys…

Signal Processing · Electrical Eng. & Systems 2020-06-02 Khuram Naveed , Muhammad Tahir Akhtar , Muhammad Faisal Siddiqui , Naveed ur Rehman

It has been shown in the past, that the six Doppler data streams obtained LISA configuration can be combined by appropriately delaying the data streams for cancelling the laser frequency noise. Raw laser noise is several orders of magnitude…

General Relativity and Quantum Cosmology · Physics 2017-08-23 K. Rajesh Nayak , A. Pai , S. V. Dhurandhar , J-Y. Vinet

This paper tackles the problem of detecting abrupt changes in the mean of a heteroscedastic signal by model selection, without knowledge on the variations of the noise. A new family of change-point detection procedures is proposed, showing…

Methodology · Statistics 2011-02-01 Sylvain Arlot , Alain Celisse

Stain variation is a phenomenon observed when distinct pathology laboratories stain tissue slides that exhibit similar but not identical color appearance. Due to this color shift between laboratories, convolutional neural networks (CNNs)…

Computer Vision and Pattern Recognition · Computer Science 2020-04-16 David Tellez , Geert Litjens , Peter Bandi , Wouter Bulten , John-Melle Bokhorst , Francesco Ciompi , Jeroen van der Laak

This paper describes a methodology for detecting anomalies from sequentially observed and potentially noisy data. The proposed approach consists of two main elements: (1) {\em filtering}, or assigning a belief or likelihood to each…

Machine Learning · Computer Science 2016-11-17 Maxim Raginsky , Rebecca Willett , Corinne Horn , Jorge Silva , Roummel Marcia

While measurement advances now allow extensive surveys of gene activity (large numbers of genes across many samples), interpretation of these data is often confounded by noise -- expression counts can differ strongly across samples due to…

Copy Number Variations (CNVs) of regions of the human genome are important in disease association studies.The digital array is a nanofluidic biochip which utilizes integrated channels and valves that partition mixtures of sample and…

Genomics · Quantitative Biology 2008-10-27 Simant Dube , Alain Mir , Robert C. Jones , Ramesh Ramakrishnan , Gang Sun

Deep neural networks achieve high prediction accuracy when the train and test distributions coincide. In practice though, various types of corruptions occur which deviate from this setup and cause severe performance degradations. Few…

Machine Learning · Computer Science 2023-05-30 Theodoros Tsiligkaridis , Athanasios Tsiligkaridis

Knowledge graphs serve as critical resources supporting intelligent systems, but they can be noisy due to imperfect automatic generation processes. Existing approaches to noise detection often rely on external facts, logical rule…

Machine Learning · Computer Science 2025-03-14 Jiaqi Sun , Yujia Zheng , Xinshuai Dong , Haoyue Dai , Kun Zhang

Falsely annotated samples, also known as noisy labels, can significantly harm the performance of deep learning models. Two main approaches for learning with noisy labels are global noise estimation and data filtering. Global noise…

Machine Learning · Computer Science 2025-07-31 Yuval Grinberg , Nimrod Harel , Jacob Goldberger , Ofir Lindenbaum

The reconciliation step of continuous-variable quantum key distribution protocols usually involves forward error correction codes. Matching the code rate and the signal-to-noise ratio (SNR) of the quantum channel is required to achieve the…

Quantum Physics · Physics 2019-05-14 Sören Kreinberg , Igor Koltchanov , André Richter

Node classification on graphs is a significant task with a wide range of applications, including social analysis and anomaly detection. Even though graph neural networks (GNNs) have produced promising results on this task, current…

Machine Learning · Computer Science 2023-06-16 Jingyang Yuan , Xiao Luo , Yifang Qin , Yusheng Zhao , Wei Ju , Ming Zhang

Convolutional Neural Networks (CNNs) have emerged as highly successful tools for image generation, recovery, and restoration. A major contributing factor to this success is that convolutional networks impose strong prior assumptions about…

Machine Learning · Computer Science 2020-02-25 Reinhard Heckel , Mahdi Soltanolkotabi

Planar homography estimation is foundational to many computer vision problems, such as Simultaneous Localization and Mapping (SLAM) and Augmented Reality (AR). However, conditions of high variance confound even the state-of-the-art…

Computer Vision and Pattern Recognition · Computer Science 2020-10-23 David Niblick , Avinash Kak

Cellular decision making is based on regulatory circuits that associate signal thresholds to specific physiological actions. This transmission of information is subjected to molecular noise what can decrease its fidelity. Here, we show…

Molecular Networks · Quantitative Biology 2017-02-08 Guillermo Rodrigo , Juan F. Poyatos

Congenital Heart Disease (CHD) remains a significant global health concern affecting approximately 1\% of births worldwide. Phonocardiography has emerged as a supplementary tool to diagnose CHD cost-effectively. However, the performance of…

Signal Processing · Electrical Eng. & Systems 2026-01-19 Lizy Abraham , Siobhan Coughlan , Kritika Rajain , Changhong Li , Saji Philip , Adam James

Conducting genome-wide association studies (GWAS) in copy number variation (CNV) level is a field where few people involves and little statistical progresses have been achieved, traditional methods suffer from many problems such as batch…

Methodology · Statistics 2020-11-17 Han Wang , Changhu Wang , Linjie Wu , Ruibin Xi

Convolutional Neural Networks (CNN) are known to exhibit poor generalization performance under distribution shifts. Their generalization have been studied extensively, and one line of work approaches the problem from a frequency-centric…

Computer Vision and Pattern Recognition · Computer Science 2023-07-25 Mehmet Kerim Yucel , Ramazan Gokberk Cinbis , Pinar Duygulu

In this paper, the traditional model based variational method and learning based algorithms are naturally integrated to address mixed noise removal problem. To be different from single type noise (e.g. Gaussian) removal, it is a challenge…

Computer Vision and Pattern Recognition · Computer Science 2018-05-22 Faqiang Wang , Haiyang Huang , Jun Liu

Physical-level noise on traveling bosonic modes remains a critical bottleneck for scalable quantum information processing. We show that for any single-mode bosonic code (qumode) corrupted by thermal or Gaussian displacement noise at loss…