Related papers: A hyponormal weighted shift on a directed tree who…
A tree is scattered if no subdivision of the complete binary tree is a subtree. Building on results of Halin, Polat and Sabidussi, we identify four types of subtrees of a scattered tree and a function of the tree into the integers at least…
Neutral macroevolutionary models, such as the Yule model, give rise to a probability distribution on the set of discrete rooted binary trees over a given leaf set. Such models can provide a signal as to the approximate location of the root…
We say that a weighted shift $W_\alpha$ with (positive) weight sequence $\alpha: \alpha_0, \alpha_1, \ldots$ is {\it moment infinitely divisible} (MID) if, for every $t > 0$, the shift with weight sequence $\alpha^t: \alpha_0^t, \alpha_1^t,…
We study the dynamical behaviour of weighted backward shift operators defined on sequence spaces over a directed tree. We provide a characterization of chaos on very general Fr\'echet sequence spaces in terms of the existence of a large…
We study isometric actions of tree automorphism groups on the infinite-dimensional hyperbolic spaces. On the one hand, we exhibit a general one-parameter family of such representations and analyse the corresponding equivariant embeddings of…
Evolutionary events such as incomplete lineage sorting and lateral gene transfer constitute major problems for inferring species trees from gene trees, as they can sometimes lead to gene trees which conflict with the underlying species…
In this note, we prove that if G is a countable group that contains a nonabelian free subgroup then every pair of nontrivial Bernoulli shifts over G are weakly isomorphic.
We call a pair of vertex-disjoint, induced subtrees of a rooted trees twins if they have the same counts of vertices by out-degrees. The likely maximum size of twins in a uniformly random, rooted Cayley tree of size $n\to\infty$ is studied.…
We introduce a new model of random tree that grows like a random recursive tree, except at some exceptional "doubling events" when the tree is replaced by two copies of itself attached to a new root. We prove asymptotic results for the size…
This paper studies the relationship between undirected (unrooted) and directed (rooted) phylogenetic networks. We describe a polynomial-time algorithm for deciding whether an undirected nonbinary phylogenetic network, given the locations of…
A phylogenetic tree is a tree with a fixed set of leaves that has no vertices of degree two. In this paper, we axiomatically define four other discrete structures on the set of leaves. We prove that each of these structures is an equivalent…
Graph isomorphism, subgraph isomorphism, and maximum common subgraphs are classical well-investigated objects. Their (parameterized) complexity and efficiently tractable cases have been studied. In the present paper, for a given set of…
Considering the wired uniform spanning forest on a nonunimodular transitive graph, we show that almost surely each tree of the wired uniform spanning forest is light. More generally we study the tilted volumes for the trees in the wired…
We classify connected spanning convex subgraphs of the square cycles. We then show that every spanning tree of $C_n^2$ is contained in a unique nontrivial connected spanning convex subgraph of $C_n^2$. As a result, we obtain a purely…
In the homomorphism order of digraphs, a duality pair is an ordered pair of digraphs $(G,H)$ such that for any digraph, $D$, $G\to D$ if and only if $D\not\to H$. The directed path on $k+1$ vertices together with the transitive tournament…
This paper considers the enumeration of ternary trees (i.e. rooted ordered trees in which each vertex has 0 or 3 children) avoiding a contiguous ternary tree pattern. We begin by finding recurrence relations for several simple tree…
We consider a branching random walk with binary state space and index set $T^k$, the infinite rooted tree in which each node has k children (also known as the model of "broadcasting on a tree"). The root of the tree takes a random value 0…
Unrooted phylogenetic networks are graphs used to represent evolutionary relationships. Accurately reconstructing such networks is of great relevance for evolutionary biology. It has recently been conjectured that all phylogenetic networks…
The Nontrivial Projection Problem asks whether every finite-dimensional normed space of dimension greater than one admits a well-bounded projection of non-trivial rank and corank or, equivalently, whether every centrally symmetric convex…
An evolutionary tree is a rooted tree where each internal vertex has at least two children and where the leaves are labeled with distinct symbols representing species. Evolutionary trees are useful for modeling the evolutionary history of…