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Statistical inference in evolutionary models with site-dependence is a long-standing challenge in phylogenetics and computational biology. We consider the problem of approximating marginal sequence likelihoods under dependent-site models of…

Computation · Statistics 2025-11-12 Joseph Mathews , Scott C. Schmidler

We consider the problem of verifying stochastic models of biochemical networks against behavioral properties expressed in temporal logic terms. Exact probabilistic verification approaches such as, for example, CSL/PCTL model checking, are…

Computational Engineering, Finance, and Science · Computer Science 2009-12-15 Paolo Ballarini , Michele Forlin , Tommaso Mazza , Davide Prandi

CTL is the dominant temporal specification language in practice mainly due to the fact that it admits model checking in linear time. Logic programming and the database query language Datalog are often used as an implementation platform for…

Logic in Computer Science · Computer Science 2016-08-31 Foto Afrati , Theodore Andronikos , Vassia Pavlaki , Eugenie Foustoucos , Irene Guessarian

Bayesian inference for Continuous-Time Markov Chains (CTMCs) on countably infinite spaces is notoriously difficult because evaluating the likelihood exactly is intractable. One way to address this challenge is to first build a non-negative…

Computation · Statistics 2021-05-31 Miguel Biron-Lattes , Alexandre Bouchard-Côté , Trevor Campbell

Monitoring the performance of classification models in production is critical yet challenging due to strict labeling budgets, one-shot batch acquisition of labels and extremely low error rates. We propose a general framework based on…

Machine Learning · Computer Science 2026-02-02 Lupo Marsigli , Angel Lopez de Haro

We present several Monte Carlo strategies for simulating discrete-time Markov chains with continuous multi-dimensional state space; we focus on stratified techniques. We first analyze the variance of the calculation of the measure of a…

Statistics Theory · Mathematics 2016-03-22 Rana Fakhereddine , Rami El Haddad , Christian Lécot

Many complex systems can be described by population models, in which a pool of agents interacts and produces complex collective behaviours. We consider the problem of verifying formal properties of the underlying mathematical representation…

Logic in Computer Science · Computer Science 2017-11-13 Luca Bortolussi , Roberta Lanciani , Laura Nenzi

Bayesian models have become very popular over the last years in several fields such as signal processing, statistics, and machine learning. Bayesian inference requires the approximation of complicated integrals involving posterior…

Computation · Statistics 2021-07-20 Luca Martino , Víctor Elvira

While model checking PCTL for Markov chains is decidable in polynomial-time, the decidability of PCTL satisfiability, as well as its finite model property, are long standing open problems. While general satisfiability is an intriguing…

Logic in Computer Science · Computer Science 2015-03-20 Nathalie Bertrand , John Fearnley , Sven Schewe

We present a Communication-efficient Surrogate Likelihood (CSL) framework for solving distributed statistical inference problems. CSL provides a communication-efficient surrogate to the global likelihood that can be used for low-dimensional…

Machine Learning · Statistics 2016-11-08 Michael I. Jordan , Jason D. Lee , Yun Yang

Inference for continuous-time Markov chains (CTMCs) becomes challenging when the process is only observed at discrete time points. The exact likelihood is intractable, and existing methods often struggle even in medium-dimensional…

Methodology · Statistics 2025-07-23 Tao Tang , Lachlan Astfalck , David Dunson

Markov chain Monte Carlo (MCMC) sampling is an important and commonly used tool for the analysis of hierarchical models. Nevertheless, practitioners generally have two options for MCMC: utilize existing software that generates a black-box…

Statistical model checking (SMC) is a technique for analysis of probabilistic systems that may be (partially) unknown. We present an SMC algorithm for (unbounded) reachability yielding probably approximately correct (PAC) guarantees on the…

Systems and Control · Computer Science 2021-02-02 Pranav Ashok , Jan Křetínský , Maximilian Weininger

We develop a central limit theorem (CLT) for a non-parametric estimator of the transition matrices in controlled Markov chains (CMCs) with finite state-action spaces. Our results establish precise conditions on the logging policy under…

Statistics Theory · Mathematics 2026-03-26 Ziwei Su , Imon Banerjee , Diego Klabjan

The fixed-horizon constrained Markov Decision Process (C-MDP) is a well-known model for planning in stochastic environments under operating constraints. Chance-Constrained MDP (CC-MDP) is a variant that allows bounding the probability of…

Artificial Intelligence · Computer Science 2023-04-19 Majid Khonji

Rough volatility models have recently been empirically shown to provide a good fit to historical volatility time series and implied volatility smiles of SPX options. They are continuous-time stochastic volatility models, whose volatility…

Mathematical Finance · Quantitative Finance 2021-11-01 Jingtang Ma , Wensheng Yang , Zhenyu Cui

Probabilistic Computation Tree Logic (PCTL) is frequently used to formally specify control objectives such as probabilistic reachability and safety. In this work, we focus on model checking PCTL specifications statistically on Markov…

Machine Learning · Computer Science 2020-04-23 Yu Wang , Nima Roohi , Matthew West , Mahesh Viswanathan , Geir E. Dullerud

Given a finite metric space $(X\cup Y, \mathbf{d})$ the $k$-median problem is to find a set of $k$ centers $C\subseteq Y$ that minimizes $\sum_{p\in X} \min_{c\in C} \mathbf{d}(p,c)$. In general metrics, the best polynomial time algorithm…

Data Structures and Algorithms · Computer Science 2026-03-26 Anne Driemel , Jan Höckendorff , Ioannis Psarros , Christian Sohler , Di Yue

In classification problems, sampling bias between training data and testing data is critical to the ranking performance of classification scores. Such bias can be both unintentionally introduced by data collection and intentionally…

Methodology · Statistics 2017-11-02 Chandler Zuo

Verifying that a network configuration satisfies a given boolean predicate is a fundamental problem in distributed computing. Many variations of this problem have been studied, for example, in the context of proof labeling schemes (PLS),…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-08-22 Rafail Ostrovsky , Mor Perry , Will Rosenbaum