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Health systems are rapidly deploying large language models (LLMs) that use clinical notes for clinical decision support applications. However, modern documentation practices rely heavily on templates, copy--paste shortcuts, and…

Computers and Society · Computer Science 2026-04-21 Jordan L. Cahoon , Chloe Stanwyck , Asad Aali , Rachel Madding , Emma Sun , Yixing Jiang , Renumathy Dhanasekaran , Emily Alsentzer

Optimizing high-performance power electronic equipment, such as power converters, requires multiscale simulations that incorporate the physics of power semiconductor devices and the dynamics of other circuit components, especially in…

Systems and Control · Electrical Eng. & Systems 2025-01-20 Qingyuan Shi , Chijie Zhuang , Jiapeng Liu , Bo Lin , Xiyu Peng , Dan Wu , Zhicheng Liu , Rong Zeng

Histopathology image synthesis aims to address the data shortage issue in training deep learning approaches for accurate cancer detection. However, existing methods struggle to produce realistic images that have accurate nuclei boundaries…

Image and Video Processing · Electrical Eng. & Systems 2023-01-25 Sujata Butte , Haotian Wang , Aleksandar Vakanski , Min Xian

In the rapidly growing field of wearable technology, optical devices are emerging as a significant innovation, offering non-invasive methods for analyzing skin and underlying tissue properties. Despite their promise, progress has been…

Human-Computer Interaction · Computer Science 2024-07-18 Nazim A. Belabbaci , Mohammad Arif Ul Alam

High-throughput sequencing (HTS) technologies have revolutionized the field of genomics, enabling rapid and cost-effective genome analysis for various applications. However, the increasing volume of genomic data generated by HTS…

Hardware Architecture · Computer Science 2023-06-01 Onur Mutlu , Can Firtina

The advent of DNA and RNA sequencing has revolutionized the study of genomics and molecular biology. Next generation sequencing (NGS) technologies like Illumina, Ion Torrent, SOLiD sequencing etc. have brought about a quick and cheap way to…

Genomics · Quantitative Biology 2021-03-26 Yun Heo , Gowthami Manikandan , Anand Ramachandran , Deming Chen

There have been several recent works proposed to utilize model-based optimization methods to improve the productivity of using high-level synthesis (HLS) to design domain-specific architectures. They would replace the time-consuming…

Hardware Architecture · Computer Science 2024-08-27 Zijian Ding , Atefeh Sohrabizadeh , Weikai Li , Zongyue Qin , Yizhou Sun , Jason Cong

Chemical mapping is a widespread technique for structural analysis of nucleic acids in which a molecule's reactivity to different probes is quantified at single-nucleotide resolution and used to constrain structural modeling. This…

Biomolecules · Quantitative Biology 2013-02-01 Pablo Cordero , Wipapat Kladwang , Christopher C. VanLang , Rhiju Das

To accurately analyze changes of anatomical structures in longitudinal imaging studies, consistent segmentation across multiple time-points is required. Existing solutions often involve independent registration and segmentation components.…

Image and Video Processing · Electrical Eng. & Systems 2019-08-28 Bo Li , Wiro Niessen , Stefan Klein , Marius de Groot , Arfan Ikram , Meike Vernooij , Esther Bron

Materials exhibiting a substitutional disorder such as multicomponent alloys and mixed metal oxides/oxyfluorides are of great importance in many scientific and technological sectors. Disordered materials constitute an overwhelmingly large…

The label scarcity problem is the main challenge that hinders the wide application of deep learning systems in automatic cardiovascular diseases (CVDs) detection using electrocardiography (ECG). Tuning pre-trained models alleviates this…

Machine Learning · Computer Science 2024-11-18 Rushuang Zhou , Lei Clifton , Zijun Liu , Kannie W. Y. Chan , David A. Clifton , Yuan-Ting Zhang , Yining Dong

The design of inorganic catalysts and the prediction of their catalytic efficiency are fundamental challenges in chemistry and materials science. Traditional catalyst evaluation methods primarily rely on machine learning techniques;…

Machine Learning · Computer Science 2025-03-11 Zhangdi Liu , Ling An , Mengke Song , Zhuohang Yu , Shan Wang , Kezhen Qi , Zhenyu Zhang , Chichun Zhou

The wafer scale integration of carbon nanotubes (CNT) remains a challenge for electronic and electromechanical applications. We propose a novel CNT integration process relying on the combination of controlled capillary assembly and buried…

Database-search algorithms, that deduce peptides from Mass Spectrometry (MS) data, have tried to improve the computational efficiency to accomplish larger, and more complex systems biology studies. Existing serial, and high-performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-08 Muhammad Haseeb , Fahad Saeed

We present a new method for calculating the temperature profile in high explosive (HE) material using a Convolutional Neural Network (CNN). To train/test the CNN, we have developed a hybrid experiment/simulation method for collecting…

Signal Processing · Electrical Eng. & Systems 2023-10-20 John Greenhall , David K. Zerkle , Eric S. Davis , Robert Broilo , Cristian Pantea

At the Large Hadron Collider, the vast amount of data from experiments demands not only sophisticated algorithms but also substantial computational power for efficient processing. This paper introduces hardware acceleration as an essential…

High Energy Physics - Experiment · Physics 2025-01-15 Pelayo Leguina López , Santiago Folgueras

The most common method to auto-grade a student's submission in a CS1 or a CS2 course is to run it against a pre-defined test suite and compare the results against reference results. However, this technique cannot be used if the correctness…

Artificial Intelligence · Computer Science 2024-10-22 Aaryen Mehta , Gagan Aryan

Conventional multi-stage cell tracking approaches rely heavily on detection or segmentation in each frame as a prerequisite, requiring substantial resources for high-quality segmentation masks and increasing the overall prediction time. To…

Image and Video Processing · Electrical Eng. & Systems 2025-10-14 Yaxuan Song , Jianan Fan , Heng Huang , Mei Chen , Weidong Cai

The current bulk materials discovery cycle has several inefficiencies from initial computational predictions through fabrication and analyses. Materials are generally evaluated in a singular fashion, relying largely on human-driven…

Materials Science · Physics 2021-02-12 Olivia F. Dippo , Kevin R. Kaufmann , Kenneth S. Vecchio

High-throughput materials synthesis methods have risen in popularity due to their potential to accelerate the design and discovery of novel functional materials, such as solution-processed semiconductors. After synthesis, key material…

Image and Video Processing · Electrical Eng. & Systems 2024-06-17 Alexander E. Siemenn , Eunice Aissi , Fang Sheng , Armi Tiihonen , Hamide Kavak , Basita Das , Tonio Buonassisi
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