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We provide a preliminary study on utilizing GPU (Graphics Processing Unit) to accelerate computation for three simulation optimization tasks with either first-order or second-order algorithms. Compared to the implementation using only CPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-19 Jinghai He , Haoyu Liu , Yuhang Wu , Zeyu Zheng , Tingyu Zhu

The study of biological systems witnessed a pervasive cross-fertilization between experimental investigation and computational methods. This gave rise to the development of new methodologies, able to tackle the complexity of biological…

Computational Engineering, Finance, and Science · Computer Science 2013-10-01 Daniela Besozzi , Giulio Caravagna , Paolo Cazzaniga , Marco Nobile , Dario Pescini , Alessandro Re

Graphics processing units (GPUs) are recently being used to an increasing degree for general computational purposes. This development is motivated by their theoretical peak performance, which significantly exceeds that of broadly available…

Computational Physics · Physics 2015-03-17 Martin Weigel

Spiking neural networks (SNNs) have emerged as a class of bio -inspired networks that leverage sparse, event-driven signaling to achieve low-power computation while inherently modeling temporal dynamics. Such characteristics align closely…

Neural and Evolutionary Computing · Computer Science 2025-06-03 Hemanth Sabbella , Archit Mukherjee , Thivya Kandappu , Sounak Dey , Arpan Pal , Archan Misra , Dong Ma

In this work, we survey the role of GPUs in real-time systems. Originally designed for parallel graphics workloads, GPUs are now widely used in time-critical applications such as machine learning, autonomous vehicles, and robotics due to…

Spiking neural networks (SNNs) recently gained momentum due to their low-power multiplication-free computing and the closer resemblance of biological processes in the nervous system of humans. However, SNNs require very long spike trains…

Hardware Architecture · Computer Science 2022-06-07 Daniel Gerlinghoff , Zhehui Wang , Xiaozhe Gu , Rick Siow Mong Goh , Tao Luo

Simulations of systems with quenched disorder are extremely demanding, suffering from the combined effect of slow relaxation and the need of performing the disorder average. As a consequence, new algorithms, improved implementations, and…

Computational Physics · Physics 2020-05-20 Ravinder Kumar , Jonathan Gross , Wolfhard Janke , Martin Weigel

There has been significant research over the past two decades in developing new platforms for spiking neural computation. Current neural computers are primarily developed to mimick biology. They use neural networks which can be trained to…

Neural and Evolutionary Computing · Computer Science 2015-07-23 Xavier Lagorce , Ryad Benosman

Spiking Neural Networks (SNNs) are distributed trainable systems whose computing elements, or neurons, are characterized by internal analog dynamics and by digital and sparse synaptic communications. The sparsity of the synaptic spiking…

Signal Processing · Electrical Eng. & Systems 2019-10-22 Hyeryung Jang , Osvaldo Simeone , Brian Gardner , André Grüning

The problem of solving a system of polynomial equations is one of the most fundamental problems in applied mathematics. Among them, the problem of solving a system of binomial equations form a important subclass for which specialized…

Algebraic Geometry · Mathematics 2015-03-03 Tianran Chen , Dhagash Mehta

Spiking Neural Networks (SNNs) offer an event-driven and more biologically realistic alternative to standard Artificial Neural Networks based on analog information processing. This can potentially enable energy-efficient hardware…

Emerging Technologies · Computer Science 2019-02-06 Indranil Chakraborty , Gobinda Saha , Kaushik Roy

We present a case-study on the utility of graphics cards to perform massively parallel simulation of advanced Monte Carlo methods. Graphics cards, containing multiple Graphics Processing Units (GPUs), are self-contained parallel…

Computation · Statistics 2015-05-05 Anthony Lee , Christopher Yau , Michael B. Giles , Arnaud Doucet , Christopher C. Holmes

Vertex models represent confluent tissue by polygonal or polyhedral tilings of space, with the individual cell interacting via force laws that depend on both the geometry of the cells and the topology of the tessellation. This dependence on…

Biological Physics · Physics 2017-09-13 Daniel M. Sussman

Contemporary modeling approaches to the dynamics of neural networks consider two main classes of models: biologically grounded spiking neurons and functionally inspired rate-based units. The unified simulation framework presented here…

Neurons and Cognition · Quantitative Biology 2017-11-27 Jan Hahne , David Dahmen , Jannis Schuecker , Andreas Frommer , Matthias Bolten , Moritz Helias , Markus Diesmann

The focus of my PhD thesis is on exploring parallel approaches to efficiently solve problems modeled by constraints and presenting a new proposal. Current solvers are very advanced; they are carefully designed to effectively manage the…

Artificial Intelligence · Computer Science 2019-09-23 Fabio Tardivo

Spiking neural networks (SNNs) are posited as a computationally efficient and biologically plausible alternative to conventional neural architectures, with their core computational framework primarily using the leaky integrate-and-fire…

Neural and Evolutionary Computing · Computer Science 2025-03-18 Malyaban Bal , Abhronil Sengupta

We review different aspects of the simulation of spiking neural networks. We start by reviewing the different types of simulation strategies and algorithms that are currently implemented. We next review the precision of those simulation…

While classical neural networks take a position of a leading method in the machine learning community, spiking neuromorphic systems bring attention and large projects in neuroscience. Spiking neural networks were shown to be able to…

Neural and Evolutionary Computing · Computer Science 2016-04-07 Sergei Dytckov , Masoud Daneshtalab

The efficiency of modern machine intelligence depends on high accuracy with minimal computational cost. In spiking neural networks (SNNs), synaptic delays are crucial for encoding temporal structure, yet existing models treat them as fully…

Neural and Evolutionary Computing · Computer Science 2025-12-19 Lennart P. L. Landsmeer , Amirreza Movahedin , Mario Negrello , Said Hamdioui , Christos Strydis

Spiking neural networks (SNNs) provide an energy-efficient solution by utilizing the spike-based and sparse nature of biological systems. Since the advent of Transformers, SNNs have struggled to compete with artificial networks on long…

Neural and Evolutionary Computing · Computer Science 2024-10-24 Yan Zhong , Ruoyu Zhao , Chao Wang , Qinghai Guo , Jianguo Zhang , Zhichao Lu , Luziwei Leng