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We study optimal two-sector (vegetative and reproductive) allocation models of annual plants in temporally variable environments, that incorporate effects of density dependent lifetime variability and juvenile mortality in a fitness…

Populations and Evolution · Quantitative Biology 2022-06-24 Sergiy Koshkin , Zachary Zalles , Michael F. Tobin , Nicolas Toumbacaris , Cameron Spiess

The adoption of agroecological practices will be crucial to address the challenges of climate change and biodiversity loss. Such practices favor the cultivation of plants in complex mixtures with layouts differing from the monoculture…

Populations and Evolution · Quantitative Biology 2024-09-26 Julian Talbot , Pascal Viot , David Colliaux

Producing higher-quality crops within shortened breeding cycles ensures global food availability and security, but this improvement intensifies logistical and productivity challenges for seed industries in the year-round breeding process…

Machine Learning · Computer Science 2022-07-05 Javad Ansarifar , Faezeh Akhavizadegan , Lizhi Wang

In this article, we focus on a periodic resource allocation problem applied to a dynamical system which comes from a biological system. More precisely, we consider a system with $N$ resources and $N$ activities, each activity use the…

Numerical Analysis · Mathematics 2022-06-01 Olivier Bernard , Liu-Di Lu , Julien Salomon

The seasonal production of fruit and seeds resembles opening a feeding station, such as a restaurant agents/ customers will arrive at a certain rate and pick fruit (get served) at a certain rate following some appropriate processes.…

Optimization and Control · Mathematics 2015-03-09 Muhammad Sulaiman , Abdellah Salhi

Plant breeding and variety trials are usually conducted in multiple environments sampled from a defined target population of environments in order to characterize the performance of breeding lines or varieties. When the population is large…

Applications · Statistics 2026-05-01 Maryna Prus , Lenka Filová , Hans-Peter Piepho , Waqas Ahmed Malik

We formulate a statistical-mechanical description of a recently introduced random planting model in which plants are represented by growing hard disks. Seedlings of negligible size are introduced at random positions in a field, grow at a…

Statistical Mechanics · Physics 2026-02-17 Julian Talbot

Habitat loss is one of the biggest threats facing plant species nowadays. We formulate a simple mathematical model of seed dispersal on reduced habitats to discuss survival of the species in relation to the habitat size and seeds production…

Probability · Mathematics 2023-05-24 Cristian F. Coletti , Nevena Marić , Pablo M. Rodriguez

Model trees provide an appealing way to perform interpretable machine learning for both classification and regression problems. In contrast to ``classic'' decision trees with constant values in their leaves, model trees can use linear…

Machine Learning · Computer Science 2026-03-11 Sabino Francesco Roselli , Eibe Frank

We study the influence of the seed in random trees grown according to the uniform attachment model, also known as uniform random recursive trees. We show that different seeds lead to different distributions of limiting trees from a total…

Probability · Mathematics 2014-10-22 Sébastien Bubeck , Ronen Eldan , Elchanan Mossel , Miklós Z. Rácz

In order to avoid disadvantages of monocropping for soil and environment, it is advisable to practice intercropping of various plant species whenever possible. However, intercropping is challenging as it requires a balanced planting…

Computers and Society · Computer Science 2021-12-21 Maurice Günder , Nico Piatkowski , Laura von Rueden , Rafet Sifa , Christian Bauckhage

We study an optimal control problem arising from a resource allocation problem in cellular metabolism. A minimalistic model that describes the production of enzymatic vs. non-enzymatic biomass components from a single nutrient source is…

Optimization and Control · Mathematics 2017-04-10 Steffen Waldherr , Henning Lindhorst

Growing mixtures of annual arable crop species or genotypes is a promising way to improve crop production without increasing agricultural inputs. To design optimal crop mixtures, choices of species, genotypes, sowing proportion, plant…

New crop varieties are extensively tested in multi-environment trials in order to obtain a solid empirical basis for recommendations to farmers. When the target population of environments is large and heterogeneous, a division into…

Applications · Statistics 2020-04-14 Maryna Prus , Hans-Peter Piepho

We introduce a model of traveling agents ({\it e.g.} frugivorous animals) who feed on randomly located vegetation patches and disperse their seeds, thus modifying the spatial distribution of resources in the long term. It is assumed that…

Populations and Evolution · Quantitative Biology 2015-05-13 D. Boyer , O. López-Corona

The recursive and hierarchical structure of full rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. In most of these cases, the full rooted tree is…

Machine Learning · Statistics 2022-03-24 Yuta Nakahara , Shota Saito , Akira Kamatsuka , Toshiyasu Matsushima

Accounting for the annual climatic variability is a well-known issue for simulation-based studies of environmental models. It often requires intensive sampling (e.g., averaging the simulation outputs over many climatic series), which…

Optimization and Control · Mathematics 2015-09-21 Victor Picheny , Ronan Trépos , Bastien Poublan , Pierre Casadebaig

Motivated by a potential application in economics, we investigate a simple dynamical scheme to produce planted solutions in optimization problems with continuous variables. We consider the perceptron model as a prototypical model. Starting…

Disordered Systems and Neural Networks · Physics 2019-12-05 Dhruv Sharma , Jean-Philippe Bouchaud , Marco Tarzia , Francesco Zamponi

We consider an infinite time horizon spatially distributed optimal harvesting problem for a vegetation and soil water reaction diffusion system, with rainfall as the main external parameter. By Pontryagin's maximum principle we derive the…

Optimization and Control · Mathematics 2016-01-12 Hannes Uecker

Numerical plant models can predict the outcome of plant traits modifications resulting from genetic variations, on plant performance, by simulating physiological processes and their interaction with the environment. Optimization methods…

Quantitative Methods · Quantitative Biology 2017-06-20 Victor Picheny , Pierre Casadebaig , Ronan Trépos , Robert Faivre , David Da Silva , Patrick Vincourt , Evelyne Costes
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