Related papers: Fast $q$-gram Mining on SLP Compressed Strings
We show how to determine whether a given pattern p of length m occurs in a given text t of length n in ${\tilde O}(\sqrt{n}+\sqrt{m})$\footnote{${\tilde O}$ allows for logarithmic factors in m and $n/m$} time, with inverse polynomial…
We present a new data structure called the \emph{Compressed Random Access Memory} (CRAM) that can store a dynamic string $T$ of characters, e.g., representing the memory of a computer, in compressed form while achieving asymptotically…
In this paper we present a really simple linear-time algorithm constructing a context-free grammar of size O(g log (N/g)) for the input string, where N is the size of the input string and g the size of the optimal grammar generating this…
We present a new algorithm for subsequence matching in grammar compressed strings. Given a grammar of size $n$ compressing a string of size $N$ and a pattern string of size $m$ over an alphabet of size $\sigma$, our algorithm uses…
We present novel variants of fully online LCA (FOLCA), a fully online grammar compression that builds a straight line program (SLP) and directly encodes it into a succinct representation in an online manner. FOLCA enables a direct encoding…
Let $S_{T}(k)$ denote the set of distinct substrings of length $k$ in a string $T$, then the $k$-th substring complexity is defined by its cardinality $|S_{T}(k)|$. Recently, $\delta = \max \{ |S_{T}(k)| / k : k \ge 1 \}$ is shown to be a…
Time-frequency analysis has been applied successfully in many fields. However, the traditional methods, like short time Fourier transform and Cohen distribution, suffer from the low resolution or the interference of the cross terms. To…
Computing the {\em matching statistics} of a string $P[1..m]$ with respect to a text $T[1..n]$ is a fundamental problem which has application to genome sequence comparison. In this paper, we study the problem of computing the matching…
The linear complexity of a sequence $s$ is one of the measures of its predictability. It represents the smallest degree of a linear recursion which the sequence satisfies. There are several algorithms to find the linear complexity of a…
We present a highly parallelizable text compression algorithm that scales efficiently to terabyte-sized datasets. Our method builds on locally consistent grammars, a lightweight form of compression, combined with simple recompression…
A Random Access query to a string $T\in [0..\sigma)^n$ asks for the character $T[i]$ at a given position $i\in [0..n)$. In $O(n\log\sigma)$ bits of space, this fundamental task admits constant-time queries. While this is optimal in the…
Let $f$ be a fixed (holomorphic or Maass) modular cusp form. Let $\cq$ be a Dirichlet character mod $q$. We describe a fast algorithm that computes the value $L(1/2,f\times\chi_q)$ up to any specified precision. In the case when $q$ is…
Longest common extension queries (often called longest common prefix queries) constitute a fundamental building block in multiple string algorithms, for example computing runs and approximate pattern matching. We show that a sequence of $q$…
We show that the number of distinct squares in a packed string of length $n$ over an alphabet of size $\sigma$ can be computed in $O(n/\log_\sigma n)$ time in the word-RAM model. This paper is the first to introduce a sublinear-time…
Large Language Models (LLMs) have demonstrated remarkable proficiency in language comprehension and generation; however, their widespread adoption is constrained by substantial bandwidth and computational demands. While pruning and low-rank…
Like [1], we present an algorithm to compute the simulation of a query pattern in a graph of labeled nodes and unlabeled edges. However, our algorithm works on a compressed graph grammar, instead of on the original graph. The speed-up of…
The least trimmed squares (LTS) is a reasonable formulation of robust regression whereas it suffers from high computational cost due to the nonconvexity and nonsmoothness of its objective function. The most frequently used FAST-LTS…
The QLP decomposition is one of the effective algorithms to approximate singular value decomposition (SVD) in numerical linear algebra. In this paper, we propose some single-pass randomized QLP decomposition algorithms for computing the…
Large language models (LLMs) have significantly advanced the natural language processing paradigm but impose substantial demands on memory and computational resources. Quantization is one of the most effective ways to reduce memory…
Compressed indexing enables powerful queries over massive and repetitive textual datasets using space proportional to the compressed input. While theoretical advances have led to highly efficient index structures, their practical…