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Tomographic imaging has benefited from advances in X-ray sources, detectors and optics to enable novel observations in science, engineering and medicine. These advances have come with a dramatic increase of input data in the form of faster…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-25 Stefano Marchesini , Anuradha Trivedi , Pablo Enfedaque , Talita Perciano , Dilworth Parkinson

In recent years, there has been a flurry of research in deep neural network pruning and compression. Early approaches prune weights individually. However, it is difficult to take advantage of the resulting unstructured sparsity patterns on…

Machine Learning · Computer Science 2020-08-28 Ziheng Wang

We present a novel approach for accelerating convolutions during inference for CPU-based architectures. The most common method of computation involves packing the image into the columns of a matrix (im2col) and performing general matrix…

Computer Vision and Pattern Recognition · Computer Science 2024-11-26 Amir Ofir , Gil Ben-Artzi

In this paper, we focus on three sparse matrix operations that are relevant for machine learning applications, namely, the sparse-dense matrix multiplication (SPMM), the sampled dense-dense matrix multiplication (SDDMM), and the composition…

Machine Learning · Computer Science 2023-11-02 Mohammad Zubair , Christoph Bauinger

A new format for storing sparse matrices is proposed for efficient sparse matrix-vector (SpMV) product calculation on modern graphics processing units (GPUs). This format extends the standard compressed row storage (CRS) format and can be…

Computational Physics · Physics 2014-04-29 Zbigniew Koza , Maciej Matyka , Sebastian Szkoda , Łukasz Mirosław

We consider the problem of sparse matrix multiplication by the column row method in a distributed setting where the matrix product is not necessarily sparse. We present a surprisingly simple method for "consistent" parallel processing of…

Data Structures and Algorithms · Computer Science 2012-11-20 Andrea Campagna , Konstantin Kutzkov , Rasmus Pagh

Sparse matrix vector multiplication (SpMV) is an important kernel in scientific and engineering applications. The previous optimizations are sparse matrix format specific and expose the choice of the best format to application programmers.…

Mathematical Software · Computer Science 2012-10-10 Jiajia Li , Xiuxia Zhang , Guangming Tan , Mingyu Chen

General sparse matrix-matrix multiplication (SpGEMM) is an integral part of many scientific computing, high-performance computing (HPC), and graph analytic applications. This paper presents a new compressed sparse vector (CSV) format for…

Performance · Computer Science 2021-12-21 Erfan Bank Tavakoli , Michael Riera , Masudul Hassan Quraishi , Fengbo Ren

Deep neural networks with lots of parameters are typically used for large-scale computer vision tasks such as image classification. This is a result of using dense matrix multiplications and convolutions. However, sparse computations are…

Computer Vision and Pattern Recognition · Computer Science 2016-11-22 Suraj Srinivas , Akshayvarun Subramanya , R. Venkatesh Babu

Sparse matrix multiplication is an important kernel for large-scale graph processing and other data-intensive applications. In this paper, we implement various asynchronous, RDMA-based sparse times dense (SpMM) and sparse times sparse…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-06 Benjamin Brock , Aydın Buluç , Katherine Yelick

Recent advances in representation learning on graphs, mainly leveraging graph convolutional networks, have brought a substantial improvement on many graph-based benchmark tasks. While novel approaches to learning node embeddings are highly…

Machine Learning · Statistics 2018-11-06 Cătălina Cangea , Petar Veličković , Nikola Jovanović , Thomas Kipf , Pietro Liò

We present the design and optimization of a linear solver on General Purpose GPUs for the efficient and high-throughput evaluation of the marginalized graph kernel between pairs of labeled graphs. The solver implements a preconditioned…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-20 Yu-Hang Tang , Oguz Selvitopi , Doru Popovici , Aydın Buluç

We consider a sparse matrix-matrix multiplication (SpGEMM) setting where one matrix is square and the other is tall and skinny. This special variant, called TS-SpGEMM, has important applications in multi-source breadth-first search,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-23 Isuru Ranawaka , Md Taufique Hussain , Charles Block , Gerasimos Gerogiannis , Josep Torrellas , Ariful Azad

We introduce a code generator that converts unoptimized C++ code operating on sparse data into vectorized and parallel CPU or GPU kernels. Our approach unrolls the computation into a massive expression graph, performs redundant expression…

Programming Languages · Computer Science 2022-03-15 Philipp Herholz , Xuan Tang , Teseo Schneider , Shoaib Kamil , Daniele Panozzo , Olga Sorkine-Hornung

Sparse matrix multiplication is traditionally performed in memory and scales to large matrices using the distributed memory of multiple nodes. In contrast, we scale sparse matrix multiplication beyond memory capacity by implementing sparse…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-15 Da Zheng , Disa Mhembere , Vince Lyzinski , Joshua Vogelstein , Carey E. Priebe , Randal Burns

In recent years, a new kind of accelerated hardware has gained popularity in the Artificial Intelligence (AI) and Machine Learning (ML) communities which enables extremely high-performance tensor contractions in reduced precision for deep…

Computational Physics · Physics 2024-05-01 Adela Habib , Joshua Finkelstein , Anders M. N. Niklasson

Graph Pattern Mining (GPM) is an important, rapidly evolving, and computation demanding area. GPM computation relies on subgraph enumeration, which consists in extracting subgraphs that match a given property from an input graph. Graphics…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-12-12 Samuel Ferraz , Vinicius Dias , Carlos H. C. Teixeira , George Teodoro , Wagner Meira

Accelerators for sparse matrix multiplication are important components in emerging systems. In this paper, we study the main challenges of accelerating Sparse Matrix Multiplication (SpMM). For the situations that data is not stored in the…

Hardware Architecture · Computer Science 2019-06-04 Pareesa Ameneh Golnari , Sharad Malik

Subgraph matching is a core operation in graph analytics, supporting a broad spectrum of applications from social network analysis to bioinformatics. Recent GPU-based approaches accelerate subgraph matching by leveraging parallelism but…

Databases · Computer Science 2026-04-14 Weitian Chen , Shixuan Sun , Cheng Chen , Yongmin Hu , Yingqian Hu , Minyi Guo

In a general graph data structure like an adjacency matrix, when edges are homogeneous, the connectivity of two nodes can be sufficiently represented using a single bit. This insight has, however, not yet been adequately exploited by the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-23 Jou-An Chen , Hsin-Hsuan Sung , Xipeng Shen , Nathan Tallent , Kevin Barker , Ang Li
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