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Biomolecular networks have already found great utility in characterizing complex biological systems arising from pair-wise interactions amongst biomolecules. Here, we review how graph theoretical approaches can be applied not only for a…

Molecular Networks · Quantitative Biology 2018-12-03 Heeralal Janwa , Steven E. Massey , Julian Velev , Bud Mishra

Complex networks have emerged as a simple yet powerful framework to represent and analyze a wide range of complex systems. The problem of ranking the nodes and the edges in complex networks is critical for a broad range of real-world…

Physics and Society · Physics 2017-08-30 Hao Liao , Manuel Sebastian Mariani , Matus Medo , Yi-Cheng Zhang , Ming-Yang Zhou

Consider a dynamic network and a given distributed problem. At any point in time, there might exist several solutions that are equally good with respect to the problem specification, but that are different from an algorithmic perspective,…

Data Structures and Algorithms · Computer Science 2023-04-13 Swan Dubois , Laurent Feuilloley , Franck Petit , Mikaël Rabie

This paper deals with dynamical networks for which the relations between node signals are described by proper transfer functions and external signals can influence each of the node signals. In particular, we are interested in…

Optimization and Control · Mathematics 2018-07-24 Henk J. van Waarde , Pietro Tesi , M. Kanat Camlibel

Here we propose a generic mechanism - networked buffering - for generating robust traits in complex systems that requires two basic conditions to be satisfied: 1) agents are versatile enough to perform more than one single functional role…

Adaptation and Self-Organizing Systems · Physics 2011-12-15 James M Whitacre , Axel Bender

Real-world networks are composed of diverse interacting and evolving entities, while most of existing researches simply characterize them as particular static networks, without consideration of the evolution trend in dynamic networks.…

Social and Information Networks · Computer Science 2020-06-16 Yu Xie , Chunyi Li , Bin Yu , Chen Zhang , Zhouhua Tang

Feature models are widely used to capture the configuration space of software systems. Although automated reasoning has been studied for detecting problematic features and supporting configuration tasks, significantly less attention has…

Software Engineering · Computer Science 2026-03-18 Jose Manuel Sanchez , Miguel Angel Olivero , Ruben Heradio , Luis Cambelo , David Fernandez-Amoros

A network provides powerful means of representing complex relationships between entities by abstracting entities as vertices, and relationships as edges connecting vertices in a graph. Beyond the presence or absence of relationships, a…

Social and Information Networks · Computer Science 2020-01-15 Isuru Udayangani Hewapathirana

Fault-tolerant distributed algorithms are central for building reliable spatially distributed systems. Unfortunately, the lack of a canonical precise framework for fault-tolerant algorithms is an obstacle for both verification and…

Formal Languages and Automata Theory · Computer Science 2012-10-16 Annu John , Igor Konnov , Ulrich Schmid , Helmut Veith , Josef Widder

A new design methodology for neural networks that is guided by traditional algorithm design is presented. To prove our point, we present two heuristics and demonstrate an algorithmic technique for incorporating additional weights in their…

Machine Learning · Computer Science 2018-06-07 Abhejit Rajagopal , Shivkumar Chandrasekaran , Hrushikesh N. Mhaskar

The network paradigm is increasingly used to describe the topology and dynamics of complex systems. Here we review the results of the topological analysis of protein structures as molecular networks describing their small-world character,…

Biomolecules · Quantitative Biology 2007-06-10 Csaba Bode , Istvan A. Kovacs , Mate S. Szalay , Robin Palotai , Tamas Korcsmaros , Peter Csermely

Real-world graphs, such as social networks, financial transactions, and recommendation systems, often demonstrate dynamic behavior. This phenomenon, known as graph stream, involves the dynamic changes of nodes and the emergence and…

Machine Learning · Computer Science 2023-05-16 Yanping Zheng , Zhewei Wei , Jiajun Liu

The usual definitions of algorithmic fairness focus on population-level statistics, such as demographic parity or equal opportunity. However, in many social or economic contexts, fairness is not perceived globally, but locally, through an…

Theoretical Economics · Economics 2026-01-14 Arthur Charpentier

We propose generalizations of a number of standard network models, including the classic random graph, the configuration model, and the stochastic block model, to the case of time-varying networks. We assume that the presence and absence of…

Social and Information Networks · Computer Science 2018-05-02 Xiao Zhang , Cristopher Moore , M. E. J. Newman

Predicting the resilience of complex networks, which represents the ability to retain fundamental functionality amidst external perturbations or internal failures, plays a critical role in understanding and improving real-world complex…

Artificial Intelligence · Computer Science 2024-08-20 Chang Liu , Jingtao Ding , Yiwen Song , Yong Li

The dynamics of protection processes has been a fundamental challenge in systemic risk analysis. The conceptual principle and methodological techniques behind the mechanisms involved [in such dynamics] have been harder to grasp than…

Social and Information Networks · Computer Science 2019-07-29 Chulwook Park

Models of simple excitable dynamics on graphs are an efficient framework for studying the interplay between network topology and dynamics. This subject is a topic of practical relevance to diverse fields, ranging from neuroscience to…

Neurons and Cognition · Quantitative Biology 2015-01-12 C. Fretter , A. Lesne , C. C. Hilgetag , M. -Th. Hütt

Networks built to model real world phenomena are characeterised by some properties that have attracted the attention of the scientific community: (i) they are organised according to community structure and (ii) their structure evolves with…

Social and Information Networks · Computer Science 2019-09-04 Giulio Rossetti , Rémy Cazabet

Graphs are essential representations of many real-world data such as social networks. Recent years have witnessed the increasing efforts made to extend the neural network models to graph-structured data. These methods, which are usually…

Machine Learning · Computer Science 2018-11-07 Yao Ma , Ziyi Guo , Zhaochun Ren , Eric Zhao , Jiliang Tang , Dawei Yin

We introduce Network Automata, a framework which couples the topological evolution of a network to its structure. It is useful for dealing with networks in which the topology evolves according to some specified microscopic rules and,…

Physics and Society · Physics 2011-07-12 David M. D. Smith , Jukka-Pekka Onnela , Chiu Fan Lee , Mark Fricker , Neil F. Johnson
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