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In recent years, many large directed networks such as online social networks are collected with the help of powerful data engineering and data storage techniques. Analyses of such networks attract significant attention from both the…

Social and Information Networks · Computer Science 2025-08-01 Yunxiang Yan , Meng Jiang

In recent years, large language models (LLMs) have emerged as promising candidates for graph tasks. Many studies leverage natural language to describe graphs and apply LLMs for reasoning, yet most focus narrowly on performance benchmarks…

Machine Learning · Computer Science 2026-01-28 Yuxiang Wang , Xinnan Dai , Wenqi Fan , Yao Ma

Graph Neural Networks usually rely on the assumption that the graph topology is available to the network as well as optimal for the downstream task. Latent graph inference allows models to dynamically learn the intrinsic graph structure of…

Machine Learning · Computer Science 2023-06-28 Haitz Sáez de Ocáriz Borde , Anees Kazi , Federico Barbero , Pietro Liò

Pretrained Language Models (PLMs) such as BERT have revolutionized the landscape of Natural Language Processing (NLP). Inspired by their proliferation, tremendous efforts have been devoted to Pretrained Graph Models (PGMs). Owing to the…

Machine Learning · Computer Science 2022-03-22 Jun Xia , Yanqiao Zhu , Yuanqi Du , Stan Z. Li

The remarkable capabilities of Large Language Models (LLMs) are overshadowed by their immense computational cost. While recent work has shown that many LLM layers can be reordered or even removed with minimal impact on accuracy, these…

Machine Learning · Computer Science 2026-01-07 Ramón Calvo González , Daniele Paliotta , Matteo Pagliardini , Martin Jaggi , François Fleuret

While graph neural networks (GNNs) have shown remarkable performance across diverse graph-related tasks, their high-dimensional hidden representations render them black boxes. In this work, we propose Graph Lingual Network (GLN), a GNN…

Machine Learning · Computer Science 2025-09-16 Sunwoo Kim , Soo Yong Lee , Jaemin Yoo , Kijung Shin

Graphs with abundant attributes are essential in modeling interconnected entities and enhancing predictions across various real-world applications. Traditional Graph Neural Networks (GNNs) often require re-training for different graph tasks…

Computation and Language · Computer Science 2026-05-26 Yanchao Tan , Hang Lv , Pengxiang Zhan , Shiping Wang , Carl Yang

The goal of graph inference is to design algorithms for learning properties of a hidden graph using queries to an oracle that returns information about the graph. Graph reconstruction, verification, and property testing are all types of…

Data Structures and Algorithms · Computer Science 2025-02-26 Huck Bennett , Mitchell Black , Amir Nayyeri , Evelyn Warton

Relation extraction represents a fundamental component in the process of creating knowledge graphs, among other applications. Large language models (LLMs) have been adopted as a promising tool for relation extraction, both in supervised and…

Computation and Language · Computer Science 2026-04-13 Paolo Gajo , Domenic Rosati , Hassan Sajjad , Alberto Barrón-Cedeño

One of the most important concepts in biological network analysis is that of network motifs, which are patterns of interconnections that occur in a given network at a frequency higher than expected in a random network. In this work we are…

Discrete Mathematics · Computer Science 2020-05-29 Diego P Rubert , Eloi Araujo , Marco A Stefanes , Jens Stoye , Fábio V Martinez

Arguments are a fundamental aspect of human reasoning, in which claims are supported, challenged, and weighed against one another. We present an end-to-end large language model (LLM)-based system for reconstructing arguments from natural…

Computation and Language · Computer Science 2026-05-20 Paulo Pirozelli , Victor Hugo Nascimento Rocha , Fabio G. Cozman , Douglas Aldred

Graph-based Retrieval-Augmented Generation (RAG) has shown great potential for improving multi-level reasoning and structured evidence aggregation. However, existing graph-based RAG frameworks heavily rely on exploiting large language…

Information Retrieval · Computer Science 2026-04-21 Xiao Yue , Guangzhi Qu , Lige Gan

Line graphs are an alternative representation of graphs where each vertex of the original (root) graph becomes an edge. However not all graphs have a corresponding root graph, hence the transformation from graphs to line graphs is not…

Machine Learning · Statistics 2025-10-10 Sevvandi Kandanaarachchi , Philip Kilby , Cheng Soon Ong

Graph Neural Nets (GNNs) have received increasing attentions, partially due to their superior performance in many node and graph classification tasks. However, there is a lack of understanding on what they are learning and how sophisticated…

Machine Learning · Computer Science 2020-06-11 Ting Chen , Song Bian , Yizhou Sun

The era of data deluge has sparked the interest in graph-based learning methods in a number of disciplines such as sociology, biology, neuroscience, or engineering. In this paper, we introduce a graph recurrent neural network (GRNN) for…

Machine Learning · Computer Science 2019-02-19 Vassilis N. Ioannidis , Antonio G. Marques , Georgios B. Giannakis

Line charts are a valuable tool for data analysis and exploration, distilling essential insights from a dataset. However, access to the underlying dataset behind a line chart is rarely readily available. In this paper, we explore a novel…

Databases · Computer Science 2025-05-13 Daomin Ji , Hui Luo , Zhifeng Bao , J. Shane Culpepper

Machine learning frameworks such as graph neural networks typically rely on a given, fixed graph to exploit relational inductive biases and thus effectively learn from network data. However, when said graphs are (partially) unobserved,…

Machine Learning · Computer Science 2022-05-20 Max Wasserman , Saurabh Sihag , Gonzalo Mateos , Alejandro Ribeiro

Over the last two decades, the Latent Position Model (LPM) has become a prominent tool to obtain model-based visualizations of networks. However, the geometric structure of the LPM is inherently symmetric, in the sense that outgoing and…

Methodology · Statistics 2026-02-02 Chaoyi Lu , Riccardo Rastelli

Transformer-based large language models (LLMs) are comprised of billions of parameters arranged in deep and wide computational graphs, but it is not clear that they exploit their full capacity for all inputs. We introduce the s-Trace method…

Computation and Language · Computer Science 2026-05-27 Corentin Kervadec , Iuliia Lysova , Iuri Macocco , Marco Baroni , Gemma Boleda

We introduce the concept of pattern graphs--directed acyclic graphs representing how response patterns are associated. A pattern graph represents an identifying restriction that is nonparametrically identified/saturated and is often a…

Methodology · Statistics 2020-12-04 Yen-Chi Chen