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Biological actuators -- from myosin motors to muscles -- follow Hill's model where a dimensionless parameter $\alpha$ captures the nonlinear coupling between contraction rate and force generation. Our prior work identified a characteristic…

Adaptation and Self-Organizing Systems · Physics 2026-03-19 Jake McGrath , Colin Johnson , José Alvarado

Biological evolution is realised through the same mechanisms of birth and death that underlie change in population density. The deep interdependence between ecology and evolution is well-established, and recent models focus on integrating…

Populations and Evolution · Quantitative Biology 2025-10-14 A. Bradley Duthie , Victor J. Luque

Homophily and social influence are the fundamental mechanisms that drive the evolution of attitudes, beliefs and behaviour within social groups. Homophily relates the similarity between pairs of individuals' attitudinal states to their…

Physics and Society · Physics 2015-06-12 Jonathan Ward , Peter Grindrod

We propose two models of the evolution of a pair of competing populations. Both are lattice based. The first is a compromise between fully spatial models, which do not appear amenable to analytic results, and interacting particle system…

Probability · Mathematics 2009-09-29 Jochen Blath , Alison Etheridge , Mark Meredith

We consider a class of mass transfer models on a one-dimensional lattice with nearest-neighbour interactions. The evolution is given by the discrete backward fast diffusion equation, with exponent $\beta$ in the regime $(-\infty,0) \cup…

Mathematical Physics · Physics 2018-12-26 Constantin Eichenberg

In this paper, experimental data is presented and a simple model is developed for the time evolution of a F-amp \textit{E. Coli} culture population. In general, the bacteria life cycle as revealed by monitoring a culture's population…

Populations and Evolution · Quantitative Biology 2019-12-19 Atanu Chatterjee , Nicholas Mears , Abigail Charest , Saad Algarni , Germano Iannnacchione

Bacteria regulate their motility through a variety of mechanisms, including quorum sensing (QS) and other density-dependent responses mediated by diffusible signals. While nonlinear density-dependent motility is well known in active-matter…

Populations and Evolution · Quantitative Biology 2026-01-21 Mattia Mattei , David Soriano-Paños , Alex Arenas

The variability in cell size of an isogenic population of Escherichia coli has been widely reported in experiment. The probability density function (PDF) of cell lengths has been variously described by exponential and lognormal functions.…

Cell Behavior · Quantitative Biology 2019-05-21 Chaitanya A. Athale

We describe pattern formation in ecological systems using a version of the classical Lotka-Volterra model characterized by a spatial scale which controls the predator-prey interaction range. Analytical and simulational results show that…

Populations and Evolution · Quantitative Biology 2016-03-02 E. Brigatti , M. Oliva , M. Núñez-López , R. Oliveros-Ramos , J. Benavides

Models relating to the Species-Area curve are usually defined at the species level, and concerned only with ecological timescales. We examine an individual-based model of co-evolution on a spatial lattice based on the Tangled Nature model,…

Populations and Evolution · Quantitative Biology 2007-05-23 Daniel Lawson , Henrik Jeldtoft Jensen

This work is devoted to studying the dynamics of a structured population that is subject to the combined effects of environmental stochasticity, competition for resources, spatio-temporal heterogeneity and dispersal. The population is…

Probability · Mathematics 2018-01-24 Alexandru Hening , Dang H. Nguyen , George Yin

Regular vegetation patterns in semiarid ecosystems are believed to arise from the interplay between long-range competition and facilitation processes acting at smaller distances. We show that, under rather general conditions, long-range…

Populations and Evolution · Quantitative Biology 2014-07-24 Ricardo Martinez-Garcia , Justin M. Calabrese , Emilio Hernandez-Garcia , Cristobal Lopez

We discuss several models of the dynamics of interacting populations. The models are constructed by nonlinear differential equations and have two sets of parameters: growth rates and coefficients of interaction between populations. We…

Adaptation and Self-Organizing Systems · Physics 2013-07-29 Nikolay K. Vitanov , Zlatinka I. Dimitrova

We study the Bolker-Pacala-Dieckmann-Law (BPDL) model of population dynamics in the regime of large population density. The BPDL model is a particle system in which particles reproduce, move randomly in space, and compete with each other…

Probability · Mathematics 2024-09-17 Pascal Maillard , Sarah Penington

Modularity structures are common in various social and biological networks. However, its dynamical origin remains an open question. In this work, we set up a dynamical model describing the evolution of a social network. Based on the…

Physics and Society · Physics 2011-08-19 Menghui Li , Shuguang Guan , Choy-Heng Lai

The study of pattern-forming instabilities in reaction-diffusion systems on growing or otherwise time-dependent domains arises in a variety of settings, including applications in developmental biology, spatial ecology, and experimental…

Pattern Formation and Solitons · Physics 2022-07-11 Robert A. Van Gorder , Václav Klika , Andrew L. Krause

In this paper, we discuss the existence and uniqueness of coexistence states for a class of non-local elliptic system. This problem models the behaviour of a bacteria and a living nutrient, whose diffusion depends on the population of the…

Analysis of PDEs · Mathematics 2024-02-06 M. A. V. Costa , Y. B. C. Carranza , C. Morales-Rodrigo , A. Suarez

Throughout developmental biology and ecology, transport can be driven by nonlocal interactions. Examples include cells that migrate based on contact with pseudopodia extended from other cells, and animals that move based on their vision of…

Pattern Formation and Solitons · Physics 2023-07-07 Thomas Jun Jewell , Andrew L. Krause , Philip K. Maini , Eamonn A. Gaffney

Local coexistence of species in large ecosystems is traditionally explained within the broad framework of niche theory. However, its rationale hardly justifies rich biodiversity observed in nearly homogeneous environments. Here we consider…

Populations and Evolution · Quantitative Biology 2021-11-17 Deepak Gupta , Stefano Garlaschi , Samir Suweis , Sandro Azaele , Amos Maritan

Dispersal of species is a fundamental ecological process in the evolution and maintenance of biodiversity. Limited control over ecological parameters has hindered progress in understanding of what enables species to colonise new area, as…

Populations and Evolution · Quantitative Biology 2014-05-21 Markus F. Weber , Gabriele Poxleitner , Elke Hebisch , Erwin Frey , Madeleine Opitz