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Hierarchical clustering studies a recursive partition of a data set into clusters of successively smaller size, and is a fundamental problem in data analysis. In this work we study the cost function for hierarchical clustering introduced by…

Data Structures and Algorithms · Computer Science 2021-12-17 Bogdan-Adrian Manghiuc , He Sun

Distributed processing over networks relies on in-network processing and cooperation among neighboring agents. Cooperation is beneficial when agents share a common objective. However, in many applications agents may belong to different…

Optimization and Control · Mathematics 2023-07-19 Xiaochuan Zhao , Ali H. Sayed

There are many scenarios where we may want to find pairs of textually similar documents in a large corpus (e.g. a researcher doing literature review, or an R&D project manager analyzing project proposals). To programmatically discover those…

Computation and Language · Computer Science 2020-12-16 Carlos Badenes-Olmedo , Jose-Luis Redondo García , Oscar Corcho

We give an efficient algorithm for Centroid-Linkage Hierarchical Agglomerative Clustering (HAC), which computes a $c$-approximate clustering in roughly $n^{1+O(1/c^2)}$ time. We obtain our result by combining a new Centroid-Linkage HAC…

Data Structures and Algorithms · Computer Science 2024-06-10 MohammadHossein Bateni , Laxman Dhulipala , Willem Fletcher , Kishen N Gowda , D Ellis Hershkowitz , Rajesh Jayaram , Jakub Łącki

Properly estimating correlations between objects at different spatial scales necessitates $\mathcal{O}(n^2)$ distance calculations. For this reason, most widely adopted packages for estimating correlations use clustering algorithms to…

Motivation: Clustering is a frequently used concept in variety of bioinformatical applications. We present a new method for hierarchical clustering of data called mutual information clustering (MIC) algorithm. It uses mutual information…

Quantitative Methods · Quantitative Biology 2007-05-23 Alexander Kraskov , Harald Stögbauer , Ralph G. Andrzejak , Peter Grassberger

Network clustering reveals the organization of a network or corresponding complex system with elements represented as vertices and interactions as edges in a (directed, weighted) graph. Although the notion of clustering can be somewhat…

Machine Learning · Statistics 2017-11-15 Yongjin Park , Joel S. Bader

Overlapping clusters are common in models of many practical data-segmentation applications. Suppose we are given $n$ elements to be clustered into $k$ possibly overlapping clusters, and an oracle that can interactively answer queries of the…

Machine Learning · Computer Science 2019-10-29 Wasim Huleihel , Arya Mazumdar , Muriel Médard , Soumyabrata Pal

A novel framework for consensus clustering is presented which has the ability to determine both the number of clusters and a final solution using multiple algorithms. A consensus similarity matrix is formed from an ensemble using multiple…

Machine Learning · Statistics 2014-08-06 Shaina Race , Carl Meyer

Many cluster similarity indices are used to evaluate clustering algorithms, and choosing the best one for a particular task remains an open problem. We demonstrate that this problem is crucial: there are many disagreements among the…

Discrete Mathematics · Computer Science 2021-08-27 Martijn Gösgens , Alexey Tikhonov , Liudmila Prokhorenkova

Scholars frequently employ relatedness measures to estimate the similarity between two different items (e.g., documents, authors, and institutes). Such relatedness measures are commonly based on overlapping references ($\textit{i.e.}$,…

Social and Information Networks · Computer Science 2020-04-14 Jinhyuk Yun , Sejung Ahn , June Young Lee

HDBSCAN is a density-based clustering algorithm that constructs a cluster hierarchy tree and then uses a specific stability measure to extract flat clusters from the tree. We show how the application of an additional threshold value can…

Databases · Computer Science 2021-01-22 Claudia Malzer , Marcus Baum

Constraint-based clustering algorithms exploit background knowledge to construct clusterings that are aligned with the interests of a particular user. This background knowledge is often obtained by allowing the clustering system to pose…

Machine Learning · Computer Science 2018-03-30 Toon Van Craenendonck , Sebastijan Dumančić , Elia Van Wolputte , Hendrik Blockeel

Across many areas, from neural tracking to database entity resolution, manual assessment of clusters by human experts presents a bottleneck in rapid development of scalable and specialized clustering methods. To solve this problem we…

Machine Learning · Statistics 2020-03-20 Hanlin Zhu , Xue Li , Liuyang Sun , Fei He , Zhengtuo Zhao , Lan Luan , Ngoc Mai Tran , Chong Xie

In this paper, we provide an approach to clustering relational matrices whose entries correspond to either similarities or dissimilarities between objects. Our approach is based on the value of information, a parameterized,…

Artificial Intelligence · Computer Science 2017-10-31 Isaac J. Sledge , Jose C. Principe

Clustering algorithms are an essential part of the unsupervised data science ecosystem, and extrinsic evaluation of clustering algorithms requires a method for comparing the detected clustering to a ground truth clustering. In a general…

Machine Learning · Computer Science 2026-03-23 Ryan DeWolfe , Paweł Prałat , François Théberge

Hierarchical clustering (HC) is an important data analysis technique in which the goal is to recursively partition a dataset into a tree-like structure while grouping together similar data points at each level of granularity. Unfortunately,…

Data Structures and Algorithms · Computer Science 2025-06-09 Vladimir Braverman , Jon C. Ergun , Chen Wang , Samson Zhou

Clustering is one of the most universal approaches for understanding complex data. A pivotal aspect of clustering analysis is quantitatively comparing clusterings; clustering comparison is the basis for many tasks such as clustering…

Machine Learning · Statistics 2019-06-13 Alexander J. Gates , Ian B. Wood , William P. Hetrick , Yong-Yeol Ahn

Clustering large, mixed data is a central problem in data mining. Many approaches adopt the idea of k-means, and hence are sensitive to initialisation, detect only spherical clusters, and require a priori the unknown number of clusters. We…

Machine Learning · Statistics 2020-11-13 Joshua Tobin , Mimi Zhang

Fast item ranking is an important task in recommender systems. In previous works, graph-based Approximate Nearest Neighbor (ANN) approaches have demonstrated good performance on item ranking tasks with generic searching/matching measures…

Information Retrieval · Computer Science 2022-11-02 Khoa Doan , Shulong Tan , Weijie Zhao , Ping Li
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