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A three-dimensional model of the genetic vocabulary is proposed in terms of determinative degree, an introduced characteristic of nucleotide, which reflects absolute difference between purin and pyrimidin bases in one DNA strand. In the…

Chemical Physics · Physics 2007-05-23 Diana Duplij , Steven Duplij

Many recursive functions can be defined elegantly as the unique homomorphisms, between two algebras, two coalgebras, or one each, that are induced by some universal property of a distinguished structure. Besides the well-known applications…

Logic in Computer Science · Computer Science 2015-06-25 Baltasar Trancón y Widemann , Michael Hauhs

A new iterative low complexity algorithm has been presented for computing the Walsh-Hadamard transform (WHT) of an $N$ dimensional signal with a $K$-sparse WHT, where $N$ is a power of two and $K = O(N^\alpha)$, scales sub-linearly in $N$…

Information Theory · Computer Science 2019-05-08 Robin Scheibler , Saeid Haghighatshoar , Martin Vetterli

In land surveying, the generation of maps was greatly simplified with the introduction of orthophotos and at a later stage with airborne LiDAR laser scanning systems. While the original purpose of LiDAR systems was to determine the altitude…

Neural and Evolutionary Computing · Computer Science 2014-01-21 Ronald Hochreiter , Christoph Waldhauser

The Hultman numbers enumerate permutations whose cycle graph has a given number of alternating cycles (they are relevant to the Bafna-Pevzner approach to genome comparison and genome rearrangements). We give two new interpretations of the…

Probability · Mathematics 2011-11-15 Nikita Alexeev , Peter Zograf

Finding repeated patterns or motifs in a time series is an important unsupervised task that has still a number of open issues, starting by the definition of motif. In this paper, we revise the notion of motif support, characterizing it as…

Machine Learning · Computer Science 2016-12-06 Joan Serrà , Aleksandar Matic , Josep Luis Arcos , Alexandros Karatzoglou

Trigonometric formulas are derived for certain families of associated Legendre functions of fractional degree and order, for use in approximation theory. These functions are algebraic, and when viewed as Gauss hypergeometric functions,…

Classical Analysis and ODEs · Mathematics 2023-02-15 Robert S. Maier

Quantum communication protocols are typically formulated in terms of abstract qudit states and operations, leaving the question of an experimental realization open. Direct translation of these protocols, say into single photons with some…

Quantum Physics · Physics 2019-05-10 Ashutosh S Marwah , Norbert Lütkenhaus

Sweepstakes reproduction may be generated by chance matching of reproduction with favorable environmental conditions. Gene genealogies generated by sweepstakes reproduction are in the domain of attraction of multiple-merger coalescents…

Probability · Mathematics 2026-01-15 Bjarki Eldon

Identifying genes associated with complex human diseases is one of the main challenges of human genetics and computational medicine. To answer this question, millions of genetic variants get screened to identify a few of importance. To…

Genomics · Quantitative Biology 2015-09-01 Aziz M. Mezlini , Fabio Fuligni , Adam Shlien , Anna Goldenberg

We have presented the basic knowledge on the structure of molecules coding the genetic information, mechanisms of transfer of this information from DNA to proteins and phenomena connected with replication of DNA. In particular, we have…

Genomics · Quantitative Biology 2009-09-30 Dorota Mackiewicz , Stanislaw Cebrat

We show that the core reasons that complex and hypercomplex valued neural networks offer improvements over their real-valued counterparts is the weight sharing mechanism and treating multidimensional data as a single entity. Their algebra…

Neural and Evolutionary Computing · Computer Science 2020-09-10 Chase J Gaudet , Anthony S Maida

Usual information theoretical results show a logarithmic coding factor of value spaces to digital binary spaces using p-adic numbering systems. The following paper discusses a less commonly used case. It applies the same results to the…

Information Theory · Computer Science 2014-08-04 Philon Nguyen

Unlabeled multigraphs have diverse applications across scientific fields, from transportation and social networks to polymer physics. In particular, multigraphs are essential for studying the relationship between the spatial organization…

Soft Condensed Matter · Physics 2026-01-21 Andrea Bonato

In this position paper, we promote the study of function spaces parameterized by machine learning models through the lens of algebraic geometry. To this end, we focus on algebraic models, such as neural networks with polynomial activations,…

Machine Learning · Computer Science 2025-06-03 Giovanni Luca Marchetti , Vahid Shahverdi , Stefano Mereta , Matthew Trager , Kathlén Kohn

Data-driven discovery of governing equations is of great significance for helping us understand intrinsic mechanisms and build physical models. Recently, numerous highly innovative algorithms have emerged, aimed at inversely discovering the…

Data Analysis, Statistics and Probability · Physics 2024-03-29 Wenjun Ma , Jun Zhang , Kaikai Feng , Haoyun Xing , Dongsheng Wen

We prove a combinatorial rule for a complete decomposition, in terms of Langlands parameters, for representations of p-adic $GL_n$ that appear as parabolic induction from a large family (ladder representations). Our rule obviates the need…

Representation Theory · Mathematics 2021-01-28 Maxim Gurevich

New analyses of the organization of the genetic code system together with their relation to the two classes of aminoacyl-tRNA synthetases are reported in this work. A closer inspection revealed how the enzymes and the 20 amino acids of the…

Biomolecules · Quantitative Biology 2007-05-23 Chi Ming Yang

Digital logic forms the functional basics of most modern electronic equipment and as such the creation of novel digital logic circuits is an active area of computer engineering research. This study demonstrates that genetic algorithms can…

Neural and Evolutionary Computing · Computer Science 2009-07-28 Christopher M. Frenz , Steve Peters , Wilson Julien

The category of rational mixed Hodge-Tate structures is a mixed Tate category. So thanks to the Tannakian formalism, it is equivalent to the category of finite dimensional graded comodules over a graded commutative Hopf algebra H over Q.…

Algebraic Geometry · Mathematics 2018-01-17 Alexander Goncharov , Guangyu Zhu