Related papers: On Sorting by Bounded Block Interchanges

We examine the number of cycles of length k in a permutation, as a function on the symmetric group. We write it explicitly as a combination of characters of irreducible representations. This allows to study formation of long cycles in the…

A Genome rearrangement problem studies large-scale mutations on a set of DNAs in living organisms. Various rearrangements like reversals, transpositions, translocations, fissions, fusions, and combinations and different variations have been…

We consider several computational problems related to conjugacy between subshifts of finite type, restricted to $k$-block codes: verifying a proposed $k$-block conjugacy, deciding if two shifts admit a $k$-block conjugacy, and reducing the…

For a given set of intervals on the real line, we consider the problem of ordering the intervals with the goal of minimizing an objective function that depends on the exposed interval pieces (that is, the pieces that are not covered by…

An instance $I$ of the Stable Matching Problem (SMP) is given by a bipartite graph with a preference list of neighbors for every vertex. A swap in $I$ is the exchange of two consecutive vertices in a preference list. A swap can be viewed as…

Let $M(n,d)$ be the maximum size of a permutation array on $n$ symbols with pairwise Hamming distance at least $d$. Some permutation arrays can be constructed using blocks of certain type [2] called product blocks in this paper. We study…

We consider the number of passes a permutation needs to take through a stack if we only pop the appropriate output values and start over with the remaining entries in their original order. We define a permutation $\pi$ to be $k$-pass…

In this paper we study the parameterized complexity of two well-known permutation group problems which are NP-complete. 1. Given a permutation group G=<S>, subgroup of $S_n$, and a parameter $k$, find a permutation $\pi$ in G such that…

In the Token Swapping problem we are given a graph with a token placed on each vertex. Each token has exactly one destination vertex, and we try to move all the tokens to their destinations, using the minimum number of swaps, i.e.,…

A $k$-coloring of a graph is an assignment of integers between $1$ and $k$ to vertices in the graph such that the endpoints of each edge receive different numbers. We study a local variation of the coloring problem, which imposes further…

In this work, we study the problem of scheduling a maximal set of transmitters subjected to an interference constraint across all the nodes. Given a set of nodes, the problem reduces to finding the maximum cardinality of a subset of nodes…

We investigate the intersection problem for finite semigroups, which asks for a given set of regular languages, represented by recognizing morphisms to finite semigroups, whether there exists a word contained in their intersection. We…

A problem that arises in drawings of transportation networks is to minimize the number of crossings between different transportation lines. While this can be done efficiently under specific constraints, not all solutions are visually…

Gibbons and Korach studied a fundamental problem in 1997: given an observed sequence of reads and writes of a multi-threaded program, does there exist an interleaving which is sequentially consistent? Apart from applications in testing…

We investigate the complexity of sorting in the model of sequential quantum circuits. While it is known that in general a quantum algorithm based on comparisons alone cannot outperform classical sorting algorithms by more than a constant…

How can a stack of identical blocks be arranged to extend beyond the edge of a table as far as possible? We consider a generalization of this classic puzzle to blocks that differ in width and mass. Despite the seemingly simple premise, we…

We study two variants of the shortest path problem. Given an integer k, the k-color-constrained and the k-interchange-constrained shortest path problems, respectively seek a shortest path that uses no more than k colors and one that makes…

The task of learning to map an input set onto a permuted sequence of its elements is challenging for neural networks. Set-to-sequence problems occur in natural language processing, computer vision and structure prediction, where…

We show that \emph{Sorting by Strip Swaps} (SbSS) is NP-hard by a polynomial reduction of \emph{Block Sorting}. The key idea is a local gadget, a \emph{cage}, that replaces every decreasing adjacency $(a_i,a_{i+1})$ by a guarded triple…

One of the main challenges in Computational Biology is to find the evolutionary distance between two organisms. In the field of comparative genomics, one way to estimate such distance is to find a minimum cost sequence of rearrangements…