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The PageRank is a widely used scoring function of networks in general and of the World Wide Web graph in particular. The PageRank is defined for directed graphs, but in some special cases applications for undirected graphs occur. In the…

Data Structures and Algorithms · Computer Science 2017-02-09 Vince Grolmusz

The imsets of Studen\'y (2005) are an algebraic method for representing conditional independence models. They have many attractive properties when applied to such models, and they are particularly nice for working with directed acyclic…

Methodology · Statistics 2023-08-22 Zhongyi Hu , Robin Evans

Network comparison is a widely-used tool for analyzing complex systems, with applications in varied domains including comparison of protein interactions or highlighting changes in structure of trade networks. In recent years, a number of…

Social and Information Networks · Computer Science 2023-03-09 Miguel E. P. Silva , Robert E. Gaunt , Luis Ospina-Forero , Caroline Jay , Thomas House

We generate new mathematical tools with which to quantify the macroscopic topological structure of large directed networks. This is achieved via a statistical mechanical analysis of constrained maximum entropy ensembles of directed random…

Quantitative Methods · Quantitative Biology 2015-05-27 E. S. Roberts , A. C. C. Coolen , T. Schlitt

Graph minors are a primary tool in understanding the structure of undirected graphs, with many conceptual and algorithmic implications. We propose new variants of \emph{directed graph minors} and \emph{directed graph embeddings}, by…

Discrete Mathematics · Computer Science 2019-05-30 Argyrios Deligkas , Reshef Meir

The currently most efficient algorithm for inference with a probabilistic network builds upon a triangulation of a network's graph. In this paper, we show that pre-processing can help in finding good triangulations forprobabilistic…

Artificial Intelligence · Computer Science 2013-01-14 Hans L. Bodlaender , Arie M. C. A. Koster , Frank van den Eijkhof , Linda C. van der Gaag

Let $G$ be a simple undirected graph. The regular number of $G$ is defined to be the minimum number of subsets into which the edge set of $G$ can be partitioned so that the subgraph induced by each subset is regular. In this work, we obtain…

Discrete Mathematics · Computer Science 2015-12-11 Ashwin Ganesan , Radha R. Iyer

Undirected graphical models, or Markov networks, are a popular class of statistical models, used in a wide variety of applications. Popular instances of this class include Gaussian graphical models and Ising models. In many settings,…

Statistics Theory · Mathematics 2015-09-08 Eunho Yang , Pradeep Ravikumar , Genevera I. Allen , Zhandong Liu

Across the sciences, the statistical analysis of networks is central to the production of knowledge on relational phenomena. Because of their ability to model the structural generation of networks, exponential random graph models are a…

Data Analysis, Statistics and Probability · Physics 2015-05-27 Bruce A. Desmarais , Skyler J. Cranmer

Feature extraction and dimension reduction for networks is critical in a wide variety of domains. Efficiently and accurately learning features for multiple graphs has important applications in statistical inference on graphs. We propose a…

Applications · Statistics 2021-06-23 Shangsi Wang , Jesús Arroyo , Joshua T. Vogelstein , Carey E. Priebe

A variety of statistical graphical models have been defined to represent the conditional independences underlying a random vector of interest. Similarly, many different graphs embedding various types of preferential independences, as for…

Artificial Intelligence · Computer Science 2016-10-26 Manuele Leonelli , Jim Q. Smith

Exploring small connected and induced subgraph patterns (CIS patterns, or graphlets) has recently attracted considerable attention. Despite recent efforts on computing the number of instances a specific graphlet appears in a large graph…

Social and Information Networks · Computer Science 2016-05-02 Pinghui Wang , Xiangliang Zhang , Zhenguo Li , Jiefeng Cheng , John C. S. Lui , Don Towsley , Junzhou Zhao , Jing Tao , Xiaohong Guan

This paper proposes a simple procedure to decide whether the empirically-observed adjacency or weights matrix, which characterizes the graph underlying a socio-economic network, is sufficiently symmetric (respectively, asymmetric) to…

Physics and Society · Physics 2007-05-23 Giorgio Fagiolo

We consider the problem of providing nonparametric confidence guarantees for undirected graphs under weak assumptions. In particular, we do not assume sparsity, incoherence or Normality. We allow the dimension $D$ to increase with the…

Statistics Theory · Mathematics 2013-09-27 Larry Wasserman , Mladen Kolar , Alessandro Rinaldo

Entanglement is a complexity measure of directed graphs that origins in fixed point theory. This measure has shown its use in designing efficient algorithms to verify logical properties of transition systems. We are interested in the…

Logic in Computer Science · Computer Science 2009-04-09 Walid Belkhir , Luigi Santocanale

A broader definition of generalized truncations of graphs is introduced followed by an exploration of some standard concepts and parameters with regard to generalized truncations.

Combinatorics · Mathematics 2020-07-10 Brian Alspach , Joshua B. Connor

Graph embedding techniques are pivotal in real-world machine learning tasks that operate on graph-structured data, such as social recommendation and protein structure modeling. Embeddings are mostly performed on the node level for learning…

Machine Learning · Computer Science 2022-04-26 Nan Wang , Lu Lin , Jundong Li , Hongning Wang

In recent years, Graph Neural Networks (GNNs) have made significant advances in processing structured data. However, most of them primarily adopted a model-centric approach, which simplifies graphs by converting them into undirected formats…

Machine Learning · Computer Science 2024-12-12 Henan Sun , Xunkai Li , Daohan Su , Junyi Han , Rong-Hua Li , Guoren Wang

Directed graphs are widely used in modelling of nonsymmetric relations in various sciences and engineering disciplines. We discuss invariants of strongly connected directed graphs - minimal number of vertices or edges necessary to remove to…

Discrete Mathematics · Computer Science 2016-10-21 Peteris Daugulis

We consider the normalized Laplace operator for directed graphs with positive and negative edge weights. This generalization of the normalized Laplace operator for undirected graphs is used to characterize directed acyclic graphs. Moreover,…

Combinatorics · Mathematics 2012-02-01 Frank Bauer