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The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

Populations and Evolution · Quantitative Biology 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

Personal comments are made about the title subjects, including: the relation of Friedel oscillations to Hume-Rothery stabilisation; how calculations may resolve the random-tiling versus ideal pictures of quasicrystals; and the role of…

Materials Science · Physics 2009-11-11 C. L. Henley

Temporal networks of face-to-face interactions between individuals are useful proxies of the dynamics of social systems on fast time scales. Several empirical statistical properties of these networks have been shown to be robust across a…

Physics and Society · Physics 2023-02-03 Didier Le Bail , Mathieu Génois , Alain Barrat

Modeling an unknown dynamical system is crucial in order to predict the future behavior of the system. A standard approach is training recurrent models on measurement data. While these models typically provide exact short-term predictions,…

Machine Learning · Computer Science 2023-03-02 Katharina Ensinger , Sebastian Ziesche , Barbara Rakitsch , Michael Tiemann , Sebastian Trimpe

Ecological and evolutionary processes show various population dynamics depending on internal interactions and environmental changes. While crucial in predicting biological processes, discovering general relations for such nonlinear dynamics…

Biological Physics · Physics 2022-06-23 Kyosuke Adachi , Ryosuke Iritani , Ryusuke Hamazaki

Mutualistic interactions, which are beneficial for both interacting species, are recurrently present in ecosystems. Observations of natural systems showed that, if we draw mutualistic relationships as binary links between species, the…

Physics and Society · Physics 2019-08-21 Clàudia Payrató Borrás , Laura Hernández , Yamir Moreno

Spatial structure and species interactions jointly shape the dynamics and biodiversity of ecological systems, yet most theoretical models either neglect spatial heterogeneity or sacrifice analytical tractability. Here, we provide a unified…

Populations and Evolution · Quantitative Biology 2026-05-08 Davide Bernardi , Alice Doimo , Giorgio Nicoletti , Prajwal Padmanabha , Andrea Rinaldo , Samir Suweis , Sandro Azaele , Amos Maritan

Evolutionary game theory has proven to be an elegant framework providing many fruitful insights in population dynamics and human behaviour. Here, we focus on the aspect of behavioural plasticity and its effect on the evolution of…

Populations and Evolution · Quantitative Biology 2020-09-29 M. Kleshnina , K. Kaveh , K. Chatterjee

Incorporating social interactions is essential to an accurate modeling of epidemic spreading. This work proposes a novel local mean-field density functional theory model by using the sum-of-exponential approximation of convolution kernels…

Physics and Society · Physics 2025-09-09 Ziheng Xu , Shenggao Zhou

The human niche represents the intersection of biological, ecological, cultural, and technological processes that have co-evolved to shape human adaptation and societal complexity. This paper explores the human niche through the lens of…

Populations and Evolution · Quantitative Biology 2025-06-27 Marcus J. Hamilton

We study the performance of general dynamic matching models. This model is defined by a connected graph, where nodes represent the class of items and the edges the compatibilities between items. Items of different classes arrive one by one…

Computer Science and Game Theory · Computer Science 2020-09-22 Arnaud Cadas , Josu Doncel , Jean-Michel Fourneau , Ana Bušić

Population genetics struggles to model extinction; standard models track the relative rather than absolute fitness of genotypes, while the exceptions describe only the short-term transition from imminent doom to evolutionary rescue. But…

Populations and Evolution · Quantitative Biology 2017-02-20 Jason Bertram , Kevin Gomez , Joanna Masel

We introduce a numerically tractable formulation of Bayesian joint models for longitudinal and survival data. The longitudinal process is modelled using generalised linear mixed models, while the survival process is modelled using a…

Methodology · Statistics 2021-04-23 Danilo Alvares , Francisco Javier Rubio

Coevolutionary dynamics is investigated in chemical catalysis, biological evolution, social and economic systems. The dynamics of these systems can be analyzed within the unifying framework of evolutionary game theory. In this Letter, we…

Populations and Evolution · Quantitative Biology 2012-06-12 Jens Christian Claussen , Arne Traulsen

Interactions in ecological communities are inherently nonlinear and can lead to complex population dynamics including irregular fluctuations induced by chaos. Chaotic population dynamics can exhibit violent oscillations with extremely small…

Populations and Evolution · Quantitative Biology 2007-08-29 Frank M. Hilker , Frank H. Westerhoff

Mathematical theory of selection is developed within the frameworks of general models of inhomogeneous populations with continuous time. Methods that allow us to study the distribution dynamics under natural selection and to construct…

Populations and Evolution · Quantitative Biology 2009-12-22 Georgy P. Karev

Stability is a desirable property of complex ecosystems. If a community of interacting species is at a stable equilibrium point then it is able to withstand small perturbations to component species' abundances without suffering adverse…

Populations and Evolution · Quantitative Biology 2022-09-13 Francesco Caravelli , Phillip Staniczenko

Natural ecosystems, in particular on the microbial scale, are inhabited by a large number of species. The population size of each species is affected by interactions of individuals with each other and by spatial and temporal changes in…

Populations and Evolution · Quantitative Biology 2023-06-23 Tom Burkart , Jan Willeke , Erwin Frey

We investigate the complex spatiotemporal dynamics of an ecological network with species dispersal mediated via a mean-field coupling. The local dynamics of the network are governed by the Truscott--Brindley model, which is an important…

Adaptation and Self-Organizing Systems · Physics 2017-09-13 Ramesh Arumugam , Tanmoy Banerjee , Partha Sharathi Dutta

We propose a general model to study the interplay between spatial dispersal and environment spatiotemporal fluctuations in metapopulation dynamics. An ecological landscape of favorable patches is generated like a L\'{e}vy dust, which allows…

Populations and Evolution · Quantitative Biology 2015-08-20 E. H. Colombo , C. Anteneodo