English
Related papers

Related papers: Automated Image Processing for the Analysis of DNA…

200 papers

How DNA repair enzymes find the relatively rare sites of damage is not known in great detail. Recent experiments and molecular data suggest that the individual repair enzymes do not work independently of each other, but rather interact with…

Biomolecules · Quantitative Biology 2007-05-23 Kasper Astrup Eriksen

We present an end-to-end automated workflow that uses large-scale remote compute resources and an embedded GPU platform at the edge to enable AI/ML-accelerated real-time analysis of data collected for x-ray ptychography. Ptychography is a…

Computer Vision and Pattern Recognition · Computer Science 2023-04-11 Anakha V Babu , Tekin Bicer , Saugat Kandel , Tao Zhou , Daniel J. Ching , Steven Henke , Siniša Veseli , Ryan Chard , Antonino Miceli , Mathew Joseph Cherukara

There is a high demand for fully automated methods for the analysis of primary particle size distributions of agglomerated, sintered or occluded primary particles, due to their impact on material properties. Therefore, a novel, deep…

Computer Vision and Pattern Recognition · Computer Science 2019-11-20 Max Frei , Frank Einar Kruis

Modern technology for producing extremely bright and coherent X-ray laser pulses provides the possibility to acquire a large number of diffraction patterns from individual biological nanoparticles, including proteins, viruses, and DNA.…

Methodology · Statistics 2018-07-11 Stefan Engblom , Carl Nettelblad , Jing Liu

Image descriptors based on activations of Convolutional Neural Networks (CNNs) have become dominant in image retrieval due to their discriminative power, compactness of representation, and search efficiency. Training of CNNs, either from…

Computer Vision and Pattern Recognition · Computer Science 2018-07-12 Filip Radenović , Giorgos Tolias , Ondřej Chum

In clinical diagnosis, diagnostic images that are obtained from the scanning devices serve as preliminary evidence for further investigation in the process of delivering quality healthcare. However, often the medical image may contain fault…

Image and Video Processing · Electrical Eng. & Systems 2022-01-19 Karthik K , Sowmya Kamath S

Tissue characterization has long been an important component of Computer Aided Diagnosis (CAD) systems for automatic lesion detection and further clinical planning. Motivated by the superior performance of deep learning methods on various…

Computer Vision and Pattern Recognition · Computer Science 2021-03-24 Xiang Li , Aoxiao Zhong , Ming Lin , Ning Guo , Mu Sun , Arkadiusz Sitek , Jieping Ye , James Thrall , Quanzheng Li

This paper describes a scalable active learning pipeline prototype for large-scale brain mapping that leverages high performance computing power. It enables high-throughput evaluation of algorithm results, which, after human review, are…

Automated sample preparation and electron microscopy enables acquisition of very large image data sets. These technical advances are of special importance to the field of neuroanatomy, as 3D reconstructions of neuronal processes at the nm…

We have developed a simulation-based method of spectral analysis for pile-up affected data of X-ray CCDs without any loss of photon statistics. As effects of the photon pile-up appear as complicated nonlinear detector responses, we employ a…

Instrumentation and Methods for Astrophysics · Physics 2022-03-14 Tsubasa Tamba , Hirokazu Odaka , Aya Bamba , Hiroshi Murakami , Koji Mori , Kiyoshi Hayashida , Yukikatsu Terada , Tsunefumi Mizuno , Masayoshi Nobukawa

Image segmentation is the foundation of several computer vision tasks, where pixel-wise knowledge is a prerequisite for achieving the desired target. Deep learning has shown promising performance in supervised image segmentation. However,…

Image and Video Processing · Electrical Eng. & Systems 2024-03-19 Boujemaa Guermazi , Riadh Ksantini , Naimul Khan

Machine learning is attracting surging interest across nearly all scientific areas by enabling the analysis of large datasets and the extraction of scientific information from incomplete data. Data-driven science is rapidly growing,…

Applied Physics · Physics 2025-03-17 Sung Yun Lee , Do Hyung Cho , Chulho Jung , Daeho Sung , Daewoong Nam , Sangsoo Kim , Changyong Song

This study significantly advances multi-texture synthesis using Neural Cellular Automata (NCAs) by introducing a novel training methodology that enables robust self-regeneration of textures in damaged regions. This inherent healing…

Neural and Evolutionary Computing · Computer Science 2026-05-14 Mirela-Magdalena Catrina , Ioana Cristina Plajer , Alexandra Băicoianu

The amount of image datasets collected for environmental monitoring purposes has increased in the past years as computer vision assisted methods have gained interest. Computer vision applications rely on high-quality datasets, making data…

Computer Vision and Pattern Recognition · Computer Science 2024-12-23 Mikko Impiö , Philipp M. Rehsen , Jenni Raitoharju

Diffusion models have demonstrated remarkable efficacy in generating high-quality samples. Existing diffusion-based image restoration algorithms exploit pre-trained diffusion models to leverage data priors, yet they still preserve elements…

Image and Video Processing · Electrical Eng. & Systems 2024-08-07 Hongjie Wu , Linchao He , Mingqin Zhang , Dongdong Chen , Kunming Luo , Mengting Luo , Ji-Zhe Zhou , Hu Chen , Jiancheng Lv

Plant species identification is time consuming, costly, and requires lots of efforts, and expertise knowledge. In recent, many researchers use deep learning methods to classify plants directly using plant images. While deep learning models…

Computer Vision and Pattern Recognition · Computer Science 2021-08-25 Jayani P. G. Lakshika , Thiyanga S. Talagala

Flow-Imaging Microscopy (FIM) is commonly used in both academia and industry to characterize subvisible particles (those $\le 25 \mu m$ in size) in protein therapeutics. Pharmaceutical companies are required to record vast volumes of FIM…

Quantitative Methods · Quantitative Biology 2017-09-04 Christopher P. Calderon , Austin L. Daniels , Theodore W. Randolph

In recent years, image forensics has attracted more and more attention, and many forensic methods have been proposed for identifying image processing operations. Up to now, most existing methods are based on hand crafted features, and just…

Multimedia · Computer Science 2020-09-01 Bolin Chen , Haodong Li , Weiqi Luo

X-ray computed tomography (XCT) is an important tool for high-resolution non-destructive characterization of additively-manufactured metal components. XCT reconstructions of metal components may have beam hardening artifacts such as cupping…

Image and Video Processing · Electrical Eng. & Systems 2023-09-27 Obaidullah Rahman , Singanallur V. Venkatakrishnan , Luke Scime , Paul Brackman , Curtis Frederick , Ryan Dehoff , Vincent Paquit , Amirkoushyar Ziabari

Patients diagnosed with metastatic breast cancer (mBC) typically undergo several radiographic assessments during their treatment. mBC often involves multiple metastatic lesions in different organs, it is imperative to accurately track and…

Image and Video Processing · Electrical Eng. & Systems 2024-04-26 Subrata Mukherjee , Thibaud Coroller , Craig Wang , Ravi K. Samala , Tingting Hu , Didem Gokcay , Nicholas Petrick , Berkman Sahiner , Qian Cao