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Large tree structures are ubiquitous and real-world relational datasets often have information associated with nodes (e.g., labels or other attributes) and edges (e.g., weights or distances) that need to be communicated to the viewers. Yet,…

Computational Geometry · Computer Science 2023-05-18 Kathryn Gray , Mingwei Li , Reyan Ahmed , Md. Khaledur Rahman , Ariful Azad , Stephen Kobourov , Katy Börner

Due to the curse of dimensionality and the limitation on training data, approximating high-dimensional functions is a very challenging task even for powerful deep neural networks. Inspired by the Nonlinear Level set Learning (NLL) method…

Machine Learning · Computer Science 2021-12-03 Yuankai Teng , Zhu Wang , Lili Ju , Anthony Gruber , Guannan Zhang

Fully-supervised crowd counting is a laborious task due to the large amounts of annotations. Few works focus on weekly-supervised crowd counting, where only the global crowd numbers are available for training. The main challenge of…

Computer Vision and Pattern Recognition · Computer Science 2022-02-23 Xiaoshuang Chen , Hongtao Lu

In this paper we identify several serious problems that arise in the use of syntactic data from the SSWL database for the purpose of computational phylogenetic reconstruction. We show that the most naive approach fails to produce reliable…

Computation and Language · Computer Science 2016-07-12 Kevin Shu , Sharjeel Aziz , Vy-Luan Huynh , David Warrick , Matilde Marcolli

In order to sample marginalized and/or hard-to-reach populations, respondent-driven sampling (RDS) and similar techniques reach their participants via peer referral. Under a Markov model for RDS, previous research has shown that if the…

Statistics Theory · Mathematics 2022-06-08 Sebastien Roch , Karl Rohe

Statistical techniques are needed to analyse data structures with complex dependencies such that clinically useful information can be extracted. Individual-specific networks, which capture dependencies in complex biological systems, are…

Methodology · Statistics 2023-08-30 Mariella Gregorich , Sean L. Simpson , Georg Heinze

In the heteroscedastic linear model, the weighted least squares (WLS) estimate of the model coefficients is more efficient than the ordinary least squares (OLS) esti- mate. However, the practical application of WLS is challenging because it…

Statistics Theory · Mathematics 2025-05-28 Jordan Bryan , Haibo Zhou , Didong Li

We propose a statistical method to test whether two phylogenetic trees with given alignments are significantly incongruent. Our method compares the two distributions of phylogenetic trees given by the input alignments, instead of comparing…

Populations and Evolution · Quantitative Biology 2010-04-14 Elissaveta Arnaoudova , David Haws , Peter Huggins , Jerzy W. Jaromczyk , Neil Moore , Chris Schardl , Ruriko Yoshida

A body of recent work in modeling neural activity focuses on recovering low-dimensional latent features that capture the statistical structure of large-scale neural populations. Most such approaches have focused on linear generative models,…

Neurons and Cognition · Quantitative Biology 2016-10-26 Yuanjun Gao , Evan Archer , Liam Paninski , John P. Cunningham

Automatic classification of pests and plants (both healthy and diseased) is of paramount importance in agriculture to improve yield. Conventional deep learning models based on convolutional neural networks require thousands of labeled…

Computer Vision and Pattern Recognition · Computer Science 2021-09-22 Sai Vidyaranya Nuthalapati , Anirudh Tunga

We propose a scalable framework for the learning of high-dimensional parametric maps via adaptively constructed residual network (ResNet) maps between reduced bases of the inputs and outputs. When just few training data are available, it is…

This work addresses weight optimization problem for fully-connected feed-forward neural networks. Unlike existing approaches that are based on back-propagation (BP) and chain rule gradient-based optimization (which implies iterative…

Machine Learning · Computer Science 2024-06-18 Slavisa Tomic , João Pedro Matos-Carvalho , Marko Beko

In this paper we introduce Farthest Sampling Segmentation (FSS), a new method for segmentation of triangulated surfaces, which consists of two fundamental steps: the computation of a submatrix $W^k$ of the affinity matrix $W$ and the…

Phylogenetic networks extend phylogenetic trees to model non-vertical inheritance, by which a lineage inherits material from multiple parents. The computational complexity of estimating phylogenetic networks from genome-wide data with…

Populations and Evolution · Quantitative Biology 2022-06-28 Jingcheng Xu , Cécile Ané

The approximation of data is a fundamental challenge encountered in various fields, including computer-aided geometric design, the numerical solution of partial differential equations, or the design of curves and surfaces. Numerous methods…

Numerical Analysis · Mathematics 2025-01-27 Inmaculada Garcés , José M. Ramón , Juan Ruiz-Álvarez , Dionisio F. Yáñez

Relating a set of variables X to a response y is crucial in chemometrics. A quantitative prediction objective can be enriched by qualitative data interpretation, for instance by locating the most influential features. When high-dimensional…

Machine Learning · Statistics 2023-04-21 Louna Alsouki , Laurent Duval , Clément Marteau , Rami El Haddad , François Wahl

Partial Least Squares (PLS) methods have been heavily exploited to analyse the association between two blocs of data. These powerful approaches can be applied to data sets where the number of variables is greater than the number of…

Machine Learning · Statistics 2017-02-24 Pierre Lafaye de Micheaux , Benoit Liquet , Matthew Sutton

The weighted multiplier method (WMM) is an extension of the traditional method of back-calculation method to estimate the size of a target population, which synthesizes available evidence from multiple subgroups of the target population…

Computation · Statistics 2025-06-27 Mallory J Flynn , Paul Gustafson

While linear mixed model (LMM) has shown a competitive performance in correcting spurious associations raised by population stratification, family structures, and cryptic relatedness, more challenges are still to be addressed regarding the…

Machine Learning · Computer Science 2023-02-15 Wenting Ye , Xiang Liu , Tianwei Yue , Wenping Wang

For ultra-wideband and high-rate wireless communication systems, wideband spectrum sensing (WSS) is critical, since it empowers secondary users (SUs) to capture the spectrum holes for opportunistic transmission. However, WSS encounters…

Information Retrieval · Computer Science 2024-09-16 Jibin Jia , Peihao Dong , Fuhui Zhou , Qihui Wu