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A Longest Common Extension (LCE) query on a text $T$ of length $N$ asks for the length of the longest common prefix of suffixes starting at given two positions. We show that the signature encoding $\mathcal{G}$ of size $w = O(\min(z \log N…

Data Structures and Algorithms · Computer Science 2016-06-28 Takaaki Nishimoto , Tomohiro I , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Random access to highly compressed strings -- represented by straight-line programs or Lempel-Ziv parses, for example -- is a well-studied topic. Random access to such strings in strongly sublogarithmic time is impossible in the worst case,…

Data Structures and Algorithms · Computer Science 2026-02-05 Ferdinando Cicalese , Zsuzsanna Lipták , Travis Gagie , Gonzalo Navarro , Nicola Prezza , Cristian Urbina

In many real-world database systems, a large fraction of the data is represented by strings: sequences of letters over some alphabet. This is because strings can easily encode data arising from different sources. It is often crucial to…

Data Structures and Algorithms · Computer Science 2024-07-17 Lorraine A. K. Ayad , Grigorios Loukides , Solon P. Pissis

Prefix-free parsing (PFP) was introduced by Boucher et al. (2019) as a preprocessing step to ease the computation of Burrows-Wheeler Transforms (BWTs) of genomic databases. Given a string $S$, it produces a dictionary $D$ and a parse $P$ of…

Data Structures and Algorithms · Computer Science 2020-06-23 Christina Boucher , Ondřej Cvacho , Travis Gagie , Jan Holub , Giovanni Manzini , Gonzalo Navarro , Massimiliano Rossi

Finite-state transducers (FSTs) are frequently used in speech recognition. Transducer composition is an essential operation for combining different sources of information at different granularities. However, composition is also one of the…

Computation and Language · Computer Science 2021-10-07 Shubho Sengupta , Vineel Pratap , Awni Hannun

In the last decades, the necessity to process massive amounts of textual data fueled the development of compressed text indexes: data structures efficiently answering queries on a given text while occupying space proportional to the…

Data Structures and Algorithms · Computer Science 2024-09-24 Dominik Kempa , Tomasz Kociumaka

We consider the problem of constructing a sparse suffix tree (or suffix array) for $b$ suffixes of a given text $T$ of size $n$, using only $O(b)$ words of space during construction time. Breaking the naive bound of $\Omega(nb)$ time for…

Data Structures and Algorithms · Computer Science 2012-07-06 Philip Bille , Inge Li Gørtz , Tsvi Kopelowitz , Benjamin Sach , Hjalte Wedel Vildhøj

Big data, encompassing extensive datasets, has seen rapid expansion, notably with a considerable portion being textual data, including strings and texts. Simple compression methods and standard data structures prove inadequate for…

Data Structures and Algorithms · Computer Science 2024-11-11 Takaaki Nishimoto , Yasuo Tabei

Estimating probability distribution is one of the core issues in the NLP field. However, in both deep learning (DL) and pre-DL eras, unlike the vast applications of linear-chain CRF in sequence labeling tasks, very few works have applied…

Computation and Language · Computer Science 2020-08-11 Yu Zhang , Houquan Zhou , Zhenghua Li

Sorting is a fundamental algorithmic pre-processing technique which often allows to represent data more compactly and, at the same time, speeds up search queries on it. In this paper, we focus on the well-studied problem of sorting and…

Data Structures and Algorithms · Computer Science 2023-04-24 Sung-Hwan Kim , Francisco Olivares , Nicola Prezza

The weighted ancestor problem is a well-known generalization of the predecessor problem to trees. It is known to require $\Omega(\log\log n)$ time for queries provided $O(n\mathop{\mathrm{polylog}} n)$ space is available and weights are…

Data Structures and Algorithms · Computer Science 2021-04-13 Djamal Belazzougui , Dmitry Kosolobov , Simon J. Puglisi , Rajeev Raman

Computing shortest paths is a fundamental primitive for several social network applications including socially-sensitive ranking, location-aware search, social auctions and social network privacy. Since these applications compute paths in…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-09-05 Rachit Agarwal , Matthew Caesar , P. Brighten Godfrey , Ben Y. Zhao

We consider the problem of finding repetitive structures and inherent patterns in a given string $\s{s}$ of length $n$ over a finite totally ordered alphabet. A border $\s{u}$ of a string $\s{s}$ is both a prefix and a suffix of $\s{s}$…

Data Structures and Algorithms · Computer Science 2015-06-24 Ali Alatabbi , Jacqueline W. Daykin , M. Sohel Rahman

Recently, machine learning algorithms have successfully entered large-scale real-world industrial applications (e.g. search engines and email spam filters). Here, the CPU cost during test time must be budgeted and accounted for. In this…

Machine Learning · Statistics 2013-04-23 Zhixiang Xu , Matt J. Kusner , Kilian Q. Weinberger , Minmin Chen

Efficiently word storing and searching is an important task in computer science. An application space complexity, time complexity, and overall performance depend on this string data. Many word searching data structures and algorithms exist…

Data Structures and Algorithms · Computer Science 2019-11-06 Rahat Yeasin Emon , Sharmistha Chanda Tista

Processing graphs with temporal information (the temporal graphs) has become increasingly important in the real world. In this paper, we study efficient solutions to temporal graph applications using new algorithms for Incremental Minimum…

Data Structures and Algorithms · Computer Science 2025-05-13 Xiangyun Ding , Yan Gu , Yihan Sun

Compression is beneficial because it helps detract resource usage. It reduces data storage space as well as transmission traffic and improves web pages loading. Run-length coding (RLC) is a lossless data compression algorithm. Data are…

Data Structures and Algorithms · Computer Science 2016-11-30 Kaveh Geyratmand Haghighi , Mirkamal Mirnia , Ahmad Habibizad Navin

In this paper we propose a variant of the induced suffix sorting algorithm by Nong (TOIS, 2013) that computes simultaneously the Lyndon array and the suffix array of a text in $O(n)$ time using $\sigma + O(1)$ words of working space, where…

Data Structures and Algorithms · Computer Science 2020-09-10 Felipe A. Louza , Sabrina Mantaci , Giovanni Manzini , Marinella Sciortino , Guilherme P. Telles

Long Short-Term Memory (LSTM) networks are often used to capture temporal dependency patterns. By stacking multi-layer LSTM networks, it can capture even more complex patterns. This paper explores the effectiveness of applying stacked LSTM…

Machine Learning · Computer Science 2020-11-03 Frank Xiao

Log-structured merge (LSM) trees offer efficient ingestion by appending incoming data, and thus, are widely used as the storage layer of production NoSQL data stores. To enable competitive read performance, LSM-trees periodically…

Databases · Computer Science 2022-03-01 Subhadeep Sarkar , Dimitris Staratzis , Zichen Zhu , Manos Athanassoulis
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