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Related papers: On the computation of edit distance functions

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The symmetric difference of two graphs $G_1,G_2$ on the same set of vertices $[n]=\{1,2, \ldots ,n\}$ is the graph on $[n]$ whose set of edges are all edges that belong to exactly one of the two graphs $G_1,G_2$. Let $H$ be a fixed graph…

Combinatorics · Mathematics 2023-02-07 Noga Alon

The graph edit distance (GED) is a well-established distance measure widely used in many applications. However, existing methods for the GED computation suffer from several drawbacks including oversized search space, huge memory…

Data Structures and Algorithms · Computer Science 2017-10-02 Xiaoyang Chen , Hongwei Huo , Jun Huan , Jeffrey Scott Vitter

A bipartite graph $H$ is said to have Sidorenko's property if the probability that the uniform random mapping from $V(H)$ to the vertex set of any graph $G$ is a homomorphism is at least the product over all edges in $H$ of the probability…

Combinatorics · Mathematics 2018-07-11 David Conlon , Jeong Han Kim , Choongbum Lee , Joonkyung Lee

The theory of graphons comes with the so-called cut norm and the derived cut distance. The cut norm is finer than the weak* topology (when considering the predual of $L^{1}$-functions). Dole\v{z}al and Hladk\'y [J. Combin. Theory Ser. B 137…

Combinatorics · Mathematics 2022-04-19 Martin Doležal , Jan Grebík , Jan Hladký , Israel Rocha , Václav Rozhoň

Finding the graphs that are most similar to a query graph in a large database is a common task with various applications. A widely-used similarity measure is the graph edit distance, which provides an intuitive notion of similarity and…

Databases · Computer Science 2021-10-05 Franka Bause , David B. Blumenthal , Erich Schubert , Nils M. Kriege

In this paper we offer a metric similar to graph edit distance which measures the distance between two (possibly infinite)weighted graphs with finite norm (we define the norm of a graph as the sum of absolute values of its edges). The main…

Metric Geometry · Mathematics 2009-06-16 Hamed Daneshpajouh , Hamid Reza Daneshpajouh , Farzad Didehvar

Due to their capacity to encode rich structural information, labeled graphs are often used for modeling various kinds of objects such as images, molecules, and chemical compounds. If pattern recognition problems such as clustering and…

Data Structures and Algorithms · Computer Science 2019-08-02 David B. Blumenthal

In the companion paper [Linear rank-width of distance-hereditary graphs I. A polynomial-time algorithm, Algorithmica 78(1):342--377, 2017], we presented a characterization of the linear rank-width of distance-hereditary graphs, from which…

Combinatorics · Mathematics 2017-08-16 Mamadou Moustapha Kanté , O-joung Kwon

Let $G$ be a connected graph of order $n$ with diameter $d$. Remoteness $\rho$ of $G$ is the maximum average distance from a vertex to all others and $\partial_1\geq\cdots\geq \partial_n$ are the distance eigenvalues of $G$. In \cite{AH},…

Combinatorics · Mathematics 2015-07-28 Huiqiu Lin , Kinkar Ch. Das , Baoyindureng Wu

Distance-hereditary graphs form an important class of graphs, from the theoretical point of view, due to the fact that they are the totally decomposable graphs for the split-decomposition. The previous best enumerative result for these…

Combinatorics · Mathematics 2016-08-05 Cédric Chauve , Éric Fusy , Jérémie Lumbroso

Edit distance, also known as Levenshtein distance, is an essential way to compare two strings that proved to be particularly useful in the analysis of genetic sequences and natural language processing. However, edit distance is a discrete…

Machine Learning · Computer Science 2019-04-30 Evgenii Ofitserov , Vasily Tsvetkov , Vadim Nazarov

We investigate structural and algorithmic advantages of a directed version of the well-researched class of distance-hereditary graphs. Since the previously defined distance-hereditary digraphs do not permit a recursive structure, we define…

Discrete Mathematics · Computer Science 2021-12-09 Dominique Komander , Carolin Rehs

Let $G$ be a finite, simple connected graph. The average distance of a vertex $v$ of $G$ is the arithmetic mean of the distances from $v$ to all other vertices of $G$. The remoteness $\rho(G)$ of $G$ is the maximum of the average distances…

Combinatorics · Mathematics 2024-05-27 Peter Dankelmann , Sonwabile Mafunda , Sufiyan Mallu

Sidorenko's Conjecture asserts that every bipartite graph H has the Sidorenko property, i.e., a quasirandom graph minimizes the density of H among all graphs with the same edge density. We study a stronger property, which requires that a…

Combinatorics · Mathematics 2019-12-10 Daniel Král' , Taísa Martins , Péter Pál Pach , Marcin Wrochna

A graph is said to be distance-hereditary if the distance function in every connected induced subgraph is the same as in the graph itself. We prove that the ordinary Weisfeiler-Leman algorithm correctly tests the isomorphism of any two…

Combinatorics · Mathematics 2020-05-26 Alexander L. Gavrilyuk , Roman Nedela , Ilia Ponomarenko

The symmetric difference of two graphs $G_1,G_2$ on the same set of vertices $V$ is the graph on $V$ whose set of edges are all edges that belong to exactly one of the two graphs $G_1,G_2$. For a fixed graph $H$ call a collection ${\cal G}$…

Combinatorics · Mathematics 2023-09-08 Noga Alon

A graph $H$ is an \emph{isometric} subgraph of $G$ if $d_H(u,v)= d_G(u,v)$, for every pair~$u,v\in V(H)$. A graph is \emph{distance preserving} if it has an isometric subgraph of every possible order. A graph is \emph{sequentially distance…

Discrete Mathematics · Computer Science 2025-02-14 Jason P. Smith , Emad Zahedi

Given a family of graphs $\mathcal{F}$, we prove that the normalized edit distance of any given graph $\Gamma$ to being induced $\mathcal{F}$-free is estimable with a query complexity that depends only on the bounds of the Frieze--Kannan…

Combinatorics · Mathematics 2021-02-02 Carlos Hoppen , Yoshiharu Kohayakawa , Richard Lang , Hanno Lefmann , Henrique Stagni

The Hausdorff distance is a measure of (dis-)similarity between two sets which is widely used in various applications. Most of the applied literature is devoted to the computation for sets consisting of a finite number of points. This has…

Metric Geometry · Mathematics 2020-09-22 Daniel Kraft

Edit distance is a measurement of similarity between two sequences such as strings, point sequences, or polygonal curves. Many matching problems from a variety of areas, such as signal analysis, bioinformatics, etc., need to be solved in a…

Computational Geometry · Computer Science 2020-09-10 Kyle Fox , Xinyi Li