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We consider the problem of sparse signal recovery from a small number of random projections (measurements). This is a well known NP-hard to solve combinatorial optimization problem. A frequently used approach is based on greedy iterative…

Quantitative Methods · Quantitative Biology 2009-01-25 M. Andrecut

As neural network model sizes have dramatically increased, so has the interest in various techniques to reduce their parameter counts and accelerate their execution. An active area of research in this field is sparsity - encouraging zero…

One of the key requirements for the Lattice QCD Application Development as part of the US Exascale Computing Project is performance portability across multiple architectures. Using the Grid C++ expression template as a starting point, we…

High Energy Physics - Lattice · Physics 2018-04-18 Peter A. Boyle , M. A. Clark , Carleton DeTar , Meifeng Lin , Verinder Rana , Alejandro Vaquero Avilés-Casco

In this paper, we present the design of a sample sort algorithm for manycore GPUs. Despite being one of the most efficient comparison-based sorting algorithms for distributed memory architectures its performance on GPUs was previously…

Data Structures and Algorithms · Computer Science 2009-10-01 Nikolaj Leischner , Vitaly Osipov , Peter Sanders

Sparse coding has been popularly used as an effective data representation method in various applications, such as computer vision, medical imaging and bioinformatics, etc. However, the conventional sparse coding algorithms and its manifold…

Computer Vision and Pattern Recognition · Computer Science 2013-04-04 Jing-Yan Wang

We propose a sparse algebra for samplet compressed kernel matrices, to enable efficient scattered data analysis. We show the compression of kernel matrices by means of samplets produces optimally sparse matrices in a certain S-format. It…

Numerical Analysis · Mathematics 2023-05-05 H. Harbrecht , M. Multerer , O. Schenk , Ch. Schwab

Convolutional sparse representations are a form of sparse representation with a structured, translation invariant dictionary. Most convolutional dictionary learning algorithms to date operate in batch mode, requiring simultaneous access to…

Machine Learning · Computer Science 2018-06-19 Jialin Liu , Cristina Garcia-Cardona , Brendt Wohlberg , Wotao Yin

A new hybrid algorithm for LDU-factorization for large sparse matrix combining iterative solver, which can keep the same accuracy as the classical factorization, is proposed. The last Schur complement will be generated by iterative solver…

Numerical Analysis · Mathematics 2022-08-04 Atsushi Suzuki

In this paper C-Slow Retiming (CSR) on RTL is discussed. CSR multiplies the functionality of cores by adding the same number of registers into each path. The technique is ideal for FPGAs with their already existing registers. Previously…

Hardware Architecture · Computer Science 2018-07-17 Tobias Strauch

This paper describes in detail the bitonic sort algorithm,and implements the bitonic sort algorithm based on cuda architecture.At the same time,we conduct two effective optimization of implementation details according to the characteristics…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-31 Qi Mu , Liqing Cui , Yufei Song

Computational Fluid Dynamics (CFD) simulations are often constrained by the memory-bound nature of sparse matrix-vector operations, which eventually limits performance on modern high-performance computing (HPC) systems. This work introduces…

Modern computing workloads commonly involve matrix-matrix multiplication (mmul) as a core computing pattern. Coarse-Grained Reconfigurable Arrays (CGRAs) can flexibly and efficiently support it, since they combine operation-level…

Hardware Architecture · Computer Science 2026-04-29 Yuxuan Wang , María José Belda , Fernando Castro , Katzalin Olcoz , David Atienza , Giovanni Ansaloni

Structural clustering is one of the most popular graph clustering methods, which has achieved great performance improvement by utilizing GPUs. Even though, the state-of-the-art GPU-based structural clustering algorithm, GPUSCAN, still…

Databases · Computer Science 2023-12-01 Long Yuan , Zeyu Zhou , Xuemin Lin , Zi Chen , Xiang Zhao , Fan Zhang

We present our implementation of the RHMC algorithm for staggered fermions on Graphics Processing Units using the NVIDIA CUDA programming language. While previous studies exclusively deal with the Dirac matrix inversion problem, our code…

High Energy Physics - Lattice · Physics 2010-12-15 Claudio Bonati , Guido Cossu , Massimo D'Elia , Adriano Di Giacomo

In the field of face recognition, Sparse Representation (SR) has received considerable attention during the past few years. Most of the relevant literature focuses on holistic descriptors in closed-set identification applications. The…

Computer Vision and Pattern Recognition · Computer Science 2014-12-19 Yongkang Wong , Mehrtash T. Harandi , Conrad Sanderson

Spectral-based subspace clustering methods have proved successful in many challenging applications such as gene sequencing, image recognition, and motion segmentation. In this work, we first propose a novel spectral-based subspace…

Machine Learning · Statistics 2021-06-09 Hankui Peng , Nicos G. Pavlidis

The sparse representation of graphs has shown great potential for accelerating the computation of graph applications (e.g., Social Networks, Knowledge Graphs) on traditional computing architectures (CPU, GPU, or TPU). But the exploration of…

Machine Learning · Computer Science 2024-10-28 Bo Lyu , Shengbo Wang , Shiping Wen , Kaibo Shi , Yin Yang , Lingfang Zeng , Tingwen Huang

This paper is focused on improving multi-GPU performance of a research CFD code on structured grids. MPI and OpenACC directives are used to scale the code up to 16 GPUs. This paper shows that using 16 P100 GPUs and 16 V100 GPUs can be…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-10 Weicheng Xue , Charles W. Jackson , Christoper J. Roy

Massively multicore processors, such as Graphics Processing Units (GPUs), provide, at a comparable price, a one order of magnitude higher peak performance than traditional CPUs. This drop in the cost of computation, as any…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-18 Samer Al-Kiswany , Abdullah Gharaibeh , Matei Ripeanu

General sparse matrix-matrix multiplication (SpGEMM) is an integral part of many scientific computing, high-performance computing (HPC), and graph analytic applications. This paper presents a new compressed sparse vector (CSV) format for…

Performance · Computer Science 2021-12-21 Erfan Bank Tavakoli , Michael Riera , Masudul Hassan Quraishi , Fengbo Ren