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Given two rooted, ordered, and labeled trees $P$ and $T$ the tree inclusion problem is to determine if $P$ can be obtained from $T$ by deleting nodes in $T$. This problem has recently been recognized as an important query primitive in XML…

Data Structures and Algorithms · Computer Science 2011-01-19 Philip Bille , Inge Li Goertz

Decompositional parameters such as treewidth are commonly used to obtain fixed-parameter algorithms for NP-hard graph problems. For problems that are W[1]-hard parameterized by treewidth, a natural alternative would be to use a suitable…

Data Structures and Algorithms · Computer Science 2022-03-01 Cornelius Brand , Esra Ceylan , Christian Hatschka , Robert Ganian , Viktoriia Korchemna

Orthogonal graph layout algorithms aim to produce clear, compact, and readable network diagrams by arranging nodes and edges along horizontal and vertical lines, while minimizing bends and crossings. Most existing orthogonal layout methods…

In graph theory, a tree is one of the more popular families of graphs with a wide range of applications in computer science as well as many other related fields. While there are several distance measures over the set of all trees, we…

Information Theory · Computer Science 2021-02-04 Lev Yohananov , Eitan yaakobi

Phylogenetic trees and networks are leaf-labelled graphs used to model evolution. Display graphs are created by identifying common leaf labels in two or more phylogenetic trees or networks. The treewidth of such graphs is bounded as a…

Data Structures and Algorithms · Computer Science 2018-09-05 Remie Janssen , Mark Jones , Steven Kelk , Georgios Stamoulis , Taoyang Wu

The graph invariant EPT-sum has cropped up in several unrelated fields in later years: As an objective function for hierarchical clustering, as a more fine-grained version of the classical edge ranking problem, and, specifically when the…

Data Structures and Algorithms · Computer Science 2024-07-08 Svein Høgemo

Cartograms are map-based data visualizations in which the area of each map region is proportional to an associated numeric data value (e.g., population or gross domestic product). A cartogram is called contiguous if it conforms to this area…

Human-Computer Interaction · Computer Science 2022-07-06 Ian K. Duncan , Shi Tingsheng , Simon T. Perrault , Michael T. Gastner

Decision trees are popular machine learning models that are simple to build and easy to interpret. Even though algorithms to learn decision trees date back to almost 50 years, key properties affecting their generalization error are still…

Machine Learning · Computer Science 2020-10-16 Jean-Samuel Leboeuf , Frédéric LeBlanc , Mario Marchand

A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phylogenetics is to combine such trees into larger trees, called…

Artificial Intelligence · Computer Science 2014-01-16 Neil C. A. Moore , Patrick Prosser

The early development of a zygote can be mathematically described by a developmental tree. To compare developmental trees of different species, we need to define distances on trees. If children cells after a division are not…

Combinatorics · Mathematics 2022-06-08 Yue Wang

A \emph{tree-partition} of a graph $G$ is a proper partition of its vertex set into `bags', such that identifying the vertices in each bag produces a forest. The \emph{tree-partition-width} of $G$ is the minimum number of vertices in a bag…

Combinatorics · Mathematics 2009-04-02 David R. Wood

Although shape correspondence is a central problem in geometry processing, most methods for this task apply only to two-dimensional surfaces. The neglected task of volumetric correspondence--a natural extension relevant to shapes extracted…

Graphics · Computer Science 2022-11-29 S. Mazdak Abulnaga , Oded Stein , Polina Golland , Justin Solomon

A resolving set $S$ of a graph $G$ is a subset of its vertices such that no two vertices of $G$ have the same distance vector to $S$. The Metric Dimension problem asks for a resolving set of minimum size, and in its decision form, a…

Computational Complexity · Computer Science 2019-07-19 Édouard Bonnet , Nidhi Purohit

Compact and I/O-efficient data representations play an important role in efficient algorithm design, as memory bandwidth and latency can present a significant performance bottleneck, slowing the computation by orders of magnitude. While…

Data Structures and Algorithms · Computer Science 2018-11-19 Tomáš Gavenčiak , Jakub Tětek

We propose a tree-based algorithm for classification and regression problems in the context of functional data analysis, which allows to leverage representation learning and multiple splitting rules at the node level, reducing…

Machine Learning · Statistics 2020-11-03 Edoardo Belli , Simone Vantini

A metric space $\mathcal{T}$ is a \emph{real tree} if for any pair of points $x, y \in \mathcal{T}$ all topological embeddings $\sigma$ of the segment $[0,1]$ into $\mathcal{T}$, such that $\sigma (0)=x$ and $\sigma (1)=y$, have the same…

Discrete Mathematics · Computer Science 2021-07-06 Rosa Becerra , Christopher Thraves Caro

Over some types of trees with a given number of vertices, which trees minimize or maximize the total number of subtrees or leaf containing subtrees are studied. Here are some of the main results:\ (1)\, Sharp upper bound on the total number…

Combinatorics · Mathematics 2012-06-15 Shuchao Li , Shujing Wang

The matrices of spanning rooted forests are studied as a tool for analysing the structure of digraphs and measuring their characteristics. The problems of revealing the basis bicomponents, measuring vertex proximity, and ranking from…

Combinatorics · Mathematics 2007-05-23 Pavel Chebotarev , Rafig Agaev

Succinct data structures give space-efficient representations of large amounts of data without sacrificing performance. They rely one cleverly designed data representations and algorithms. We present here the formalization in Coq/SSReflect…

Programming Languages · Computer Science 2019-07-03 Reynald Affeldt , Jacques Garrigue , Xuanrui Qi , Kazunari Tanaka

This paper offers a new authentication algorithm based on image matching of nano-resolution visual identifiers with tree-shaped patterns. The algorithm includes image-to-tree conversion by greedy extraction of the fractal pattern skeleton…

Computer Vision and Pattern Recognition · Computer Science 2022-11-16 Hao Wang , Xiwen Chen , Abolfazl Razi , Rahul Amin