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Recently, one has seen a surge of interest in developing such methods including ones for learning such representations for (undirected) graphs (while preserving important properties). However, most of the work to date on embedding graphs…

Social and Information Networks · Computer Science 2018-11-30 Jiankai Sun , Srinivasan Parthasarathy

For a given spatial graph $\mathcal{G} \subset \mathbb{R}^3$, we would like to find a closed orientable surface $\mathcal{S}$ embedded in $\mathbb{R}^3$ in which $\mathcal{G}$ is cellular embedded. However, for general $\mathcal{G}$ this is…

Geometric Topology · Mathematics 2025-10-21 Senja Barthel , Fabio Buccoliero

In the Partially Embedded Planarity problem, we are given a graph $G$ together with a topological drawing of a subgraph $H$ of $G$. The task is to decide whether the drawing can be extended to a drawing of the whole graph such that no two…

Computational Geometry · Computer Science 2024-10-18 Simon D. Fink , Ignaz Rutter , Sandhya T. P

Let $G$ be a connected planar (but not yet embedded) graph and $F$ a set of additional edges not yet in $G$. The {multiple edge insertion} problem (MEI) asks for a drawing of $G+F$ with the minimum number of pairwise edge crossings, such…

Data Structures and Algorithms · Computer Science 2015-09-29 Markus Chimani , Petr Hliněný

Given a graph $G$, the NP-hard Maximum Planar Subgraph problem asks for a planar subgraph of $G$ with the maximum number of edges. The only known non-trivial exact algorithm utilizes Kuratowski's famous planarity criterion and can be…

Data Structures and Algorithms · Computer Science 2018-04-20 Markus Chimani , Ivo Hedtke , Tilo Wiedera

A point visibility graph is a graph induced by a set of points in the plane, where every vertex corresponds to a point, and two vertices are adjacent whenever the two corresponding points are visible from each other, that is, the open…

Computational Geometry · Computer Science 2019-02-05 Jean Cardinal , Udo Hoffmann

Given a set of points in the plane, the \textsc{General Position Subset Selection} problem is that of finding a maximum-size subset of points in general position, i.e., with no three points collinear. The problem is known to be ${\rm…

Computational Geometry · Computer Science 2025-04-01 Adrian Dumitrescu

A straight-line drawing $\delta$ of a planar graph $G$ need not be plane, but can be made so by moving some of the vertices. Let shift$(G,\delta)$ denote the minimum number of vertices that need to be moved to turn $\delta$ into a plane…

Computational Geometry · Computer Science 2008-11-06 Xavier Goaoc , Jan Kratochvil , Yoshio Okamoto , Chan-Su Shin , Alexander Wolff

There are many fundamental algorithmic problems on triangulated 3-manifolds whose complexities are unknown. Here we study the problem of finding a taut angle structure on a 3-manifold triangulation, whose existence has implications for both…

Geometric Topology · Mathematics 2019-10-24 Benjamin A. Burton , Jonathan Spreer

One of the important features of an interconnection network is its ability to efficiently simulate programs or parallel algorithms written for other architectures. Such a simulation problem can be mathematically formulated as a graph…

Combinatorics · Mathematics 2019-11-19 A. Arul Shantrinal , R. Sundara Rajan , A. Ramesh Babu , S. Anil , Mohammed Ali Ahmed

Optimal Morse matchings reveal essential structures of cell complexes which lead to powerful tools to study discrete geometrical objects, in particular discrete 3-manifolds. However, such matchings are known to be NP-hard to compute on…

Computational Geometry · Computer Science 2018-10-24 Benjamin A. Burton , Thomas Lewiner , João Paixão , Jonathan Spreer

For graph classification tasks, many traditional kernel methods focus on measuring the similarity between graphs. These methods have achieved great success on resolving graph isomorphism problems. However, in some classification problems,…

Machine Learning · Computer Science 2021-02-18 Jianming Huang , Hiroyuki Kasai

Graph matching can be formalized as a combinatorial optimization problem, where there are corresponding relationships between pairs of nodes that can be represented as edges. This problem becomes challenging when there are potential…

Computer Vision and Pattern Recognition · Computer Science 2023-01-06 Dongdong Chen , Yuxing Dai , Lichi Zhang , Zhihong Zhang

Visual rendering of graphs is a key task in the mapping of complex network data. Although most graph drawing algorithms emphasize aesthetic appeal, certain applications such as travel-time maps place more importance on visualization of…

Machine Learning · Statistics 2013-02-06 Brian Baingana , Georgios B. Giannakis

We give a combinatorial condition for the existence of efficient, LP-based FPT algorithms for a broad class of graph-theoretical optimisation problems. Our condition is based on the notion of biased graphs known from matroid theory.…

Data Structures and Algorithms · Computer Science 2020-02-21 Euiwoong Lee , Magnus Wahlström

Given a planar graph $G$ and a partition of the neighbors of each vertex $v$ in four sets $UR(v)$, $UL(v)$, $DL(v)$, and $DR(v)$, the problem Windrose Planarity asks to decide whether $G$ admits a windrose-planar drawing, that is, a planar…

One powerful technique to solve NP-hard optimization problems in practice is branch-and-reduce search---which is branch-and-bound that intermixes branching with reductions to decrease the input size. While this technique is known to be very…

Data Structures and Algorithms · Computer Science 2018-10-26 Sebastian Lamm , Christian Schulz , Darren Strash , Robert Williger , Huashuo Zhang

In the area of beyond-planar graphs, i.e. graphs that can be drawn with some local restrictions on the edge crossings, the recognition problem is prominent next to the density question for the different graph classes. For 1-planar graphs,…

Data Structures and Algorithms · Computer Science 2021-08-04 Henry Förster , Michael Kaufmann , Chrysanthi N. Raftopoulou

Tree Containment is a fundamental problem in phylogenetics useful for verifying a proposed phylogenetic network, representing the evolutionary history of certain species. Tree Containment asks whether the given phylogenetic tree (for…

Populations and Evolution · Quantitative Biology 2024-06-14 Arkadiy Dushatskiy , Esther Julien , Leen Stougie , Leo van Iersel

$H$-Packing is the problem of finding a maximum number of vertex-disjoint copies of $H$ in a given graph $G$. $H$-Partition is the special case of finding a set of vertex-disjoint copies that cover each vertex of $G$ exactly once. Our goal…

Data Structures and Algorithms · Computer Science 2025-09-09 Barış Can Esmer , Dániel Marx