English
Related papers

Related papers: Analysis of attractor distances in Random Boolean …

200 papers

Boolean networks is a well-established formalism for modelling biological systems. A vital challenge for analysing a Boolean network is to identify all the attractors. This becomes more challenging for large asynchronous Boolean networks,…

Molecular Networks · Quantitative Biology 2017-06-14 Andrzej Mizera , Jun Pang , Hongyang Qu , Qixia Yuan

A chaotic network of size $N$ with delayed interactions which resembles a pseudo-inverse associative memory neural network is investigated. For a load $\alpha=P/N<1$, where $P$ stands for the number of stored patterns, the chaotic network…

Chaotic Dynamics · Physics 2015-06-03 Y. Peleg , M. zigzag , W. Kinzel , I. Kanter

The website network of a tourism destination is examined. Network theoretic metrics are used to gauge the static and dynamic characteristics of the webspace. The topology of the network is found partly similar to the one exhibited by…

Physics and Society · Physics 2009-11-11 Rodolfo Baggio

To simplify the analysis of Boolean networks, a reduction in the number of components is often considered. A popular reduction method consists in eliminating components that are not autoregulated, using variable substitution. In this work,…

Discrete Mathematics · Computer Science 2024-03-27 Robert Schwieger , Elisa Tonello

We forecast two different chaotic dynamics of the quasiperiodically forced logistic map using the well-known deep learning framework Long Short-Term Memory. We generate two data sets and use one in the training process and the other in the…

Machine Learning · Computer Science 2022-03-22 J. Meiyazhagan , M. Senthilvelan

We study the intrinsic properties of attractors in the Boolean dynamics in complex network with scale-free topology, comparing with those of the so-called random Kauffman networks. We have numerically investigated the frozen and relevant…

Disordered Systems and Neural Networks · Physics 2007-08-21 Shu-ichi Kinoshita , Kazumoto Iguchi , Hiroaki S. Yamada

Network data arises through observation of relational information between a collection of entities. Recent work in the literature has independently considered when (i) one observes a sample of networks, connectome data in neuroscience being…

Methodology · Statistics 2022-06-22 George Bolt , Simón Lunagómez , Christopher Nemeth

A determinant property of the structure of a biological network is the distribution of local connectivity patterns, i.e., network motifs. In this work, a method for creating directed, unweighted networks while promoting a certain…

Social and Information Networks · Computer Science 2016-07-29 Tuomo Mäki-Marttunen

We study partition of networks into basins of attraction based on a steepest ascent search for the node of highest degree. Each node is associated with, or "attracted" to its neighbor of maximal degree, as long as the degree is increasing.…

Disordered Systems and Neural Networks · Physics 2008-12-30 Shai Carmi , P. L. Krapivsky , Daniel ben-Avraham

Many empirical networks display an inherent tendency to cluster, i.e. to form circles of connected nodes. This feature is typically measured by the clustering coefficient (CC). The CC, originally introduced for binary, undirected graphs,…

Physics and Society · Physics 2009-11-13 Giorgio Fagiolo

Boolean networks have been the object of much attention, especially since S. Kauffman proposed them in the 1960's as models for gene regulatory networks. These systems are characterized by being defined on a Boolean state space and by…

Molecular Networks · Quantitative Biology 2007-11-21 German A. Enciso , Winfried Just

Genetic regulatory networks (GRNs) have been widely studied, yet there is a lack of understanding with regards to the final size and properties of these networks, mainly due to no network currently being complete. In this study, we analyzed…

Molecular Networks · Quantitative Biology 2019-03-13 Adrian I. Campos-González , Julio A. Freyre-González

Complex networks are a powerful modeling tool, allowing the study of countless real-world systems. They have been used in very different domains such as computer science, biology, sociology, management, etc. Authors have been trying to…

Social and Information Networks · Computer Science 2014-02-04 Burcu Kantarcı , Vincent Labatut

With the constant increase of the number of autonomous vehicles and connected objects, tools to understand and reproduce their mobility models are required. We focus on chaotic dynamics and review their applications in the design of…

Multiagent Systems · Computer Science 2023-03-30 Martin Rosalie , Serge Chaumette

Multipath propagation of radio waves in indoor/outdoor environments shows a highly irregular behavior as a function of time. Typical modeling of this phenomenon assumes the received signal is a stochastic process composed of the…

Data Analysis, Statistics and Probability · Physics 2007-05-23 C. Tannous , R. Davies , A. Angus

Boolean networks have been the object of much attention, especially since S. Kauffman proposed them in the 1960's as models for gene regulatory networks. These systems are characterized by being defined on a Boolean state space and by…

Molecular Networks · Quantitative Biology 2008-01-30 Winfried Just , German Enciso

Vehicular ad-hoc networks (VANETs) have become an extensively studied topic in contemporary research. One of the fundamental problems that has arisen in such research is understanding the network statistical properties, such as the cluster…

Systems and Control · Electrical Eng. & Systems 2019-10-01 Gleb Dubosarskii , Serguei Primak , Xianbin Wang

A wide range of networks, including small-world topology, can be modelled by the connectivity $\gamma$, and randomness $\omega$ of the links. Both learning and attractor abilities of a neural network can be measured by the mutual…

Disordered Systems and Neural Networks · Physics 2007-05-23 D. Dominguez , K. Koroutchev , E. Serrano , F. B. Rodriguez

We propose the use of Deterministic Generalized Asynchronous Random Boolean Networks [Gershenson, 2002] as models of contextual deterministic discrete dynamical systems. We show that changes in the context have drastic effects on the global…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Carlos Gershenson , Jan Broekaert , Diederik Aerts

We explore the behaviour of chaotic oscillators in hierarchical networks coupled to an external chaotic system whose intrinsic dynamics is dissimilar to the other oscillators in the network. Specifically, each oscillator couples to the…

Chaotic Dynamics · Physics 2019-05-22 Sudhanshu Shekhar Chaurasia , Sudeshna Sinha