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Dynamic Causal Modeling (DCM) is a Bayesian framework for inferring on hidden (latent) neuronal states, based on measurements of brain activity. Since its introduction in 2003 for functional magnetic resonance imaging data, DCM has been…

Quantitative Methods · Quantitative Biology 2021-04-08 Inês Pereira , Stefan Frässle , Jakob Heinzle , Dario Schöbi , Cao Tri Do , Moritz Gruber , Klaas E. Stephan

In this article the package High-dimensional Metrics (\texttt{hdm}) is introduced. It is a collection of statistical methods for estimation and quantification of uncertainty in high-dimensional approximately sparse models. It focuses on…

Methodology · Statistics 2017-09-28 Victor Chernozhukov , Chris Hansen , Martin Spindler

We believe that a wide range of physical processes conspire to shape the observed galaxy population but we remain unsure of their detailed interactions. The semi-analytic model (SAM) of galaxy formation uses multi-dimensional…

Cosmology and Nongalactic Astrophysics · Physics 2011-11-07 Yu Lu , H. J. Mo , Martin D. Weinberg , Neal Katz

Bayesian model selection provides a formal method of determining the level of support for new parameters in a model. However, if there is not a specific enough underlying physical motivation for the new parameters it can be hard to assign…

Astrophysics · Physics 2009-11-13 Christopher Gordon , Roberto Trotta

Investigation of well-motivated parameter space in the theories of Beyond the Standard Model (BSM) plays an important role in new physics discoveries. However, a large-scale exploration of models with multi-parameter or equivalent solutions…

High Energy Physics - Phenomenology · Physics 2019-04-09 Jie Ren , Lei Wu , Jin Min Yang , Jun Zhao

Dark matter cannot be observed directly, but its weak gravitational lensing slightly distorts the apparent shapes of background galaxies, making weak lensing one of the most promising probes of cosmology. Several observational studies have…

Cosmology and Nongalactic Astrophysics · Physics 2018-12-18 Dezső Ribli , Bálint Ármin Pataki , István Csabai

I define the Standard Supersymmetric Model (SSM) as the minimal supersymmetric extension ofthe Standard Model with gauge coupling unification and universal soft supersymmetry breaking at the unification scale. This well-defined model has a…

High Energy Physics - Phenomenology · Physics 2007-05-23 S. Kelley

Bayesian methods are appealing in their flexibility in modeling complex data and ability in capturing uncertainty in parameters. However, when Bayes' rule does not result in tractable closed-form, most approximate inference algorithms lack…

Machine Learning · Computer Science 2016-05-09 Bo Dai , Niao He , Hanjun Dai , Le Song

Approximate Bayesian computation (ABC) is an approach for sampling from an approximate posterior distribution in the presence of a computationally intractable likelihood function. A common implementation is based on simulating model,…

Methodology · Statistics 2013-01-16 D. Prangle , M. G. B. Blum , G. Popovic , S. A. Sisson

The recent measurements of the power spectrum of Cosmic Microwave Background anisotropies are consistent with the simplest inflationary scenario and big bang nucleosynthesis constraints. However, these results rely on the assumption of a…

We use mock galaxy survey simulations designed to resemble the Dark Energy Survey Year 1 (DES Y1) data to validate and inform cosmological parameter estimation. When similar analysis tools are applied to both simulations and real survey…

Implicit sampling is a weighted sampling method that is used in data assimilation, where one sequentially updates estimates of the state of a stochastic model based on a stream of noisy or incomplete data. Here we describe how to use…

Numerical Analysis · Mathematics 2016-01-20 Matthias Morzfeld , Xuemin Tu , Jon Wilkening , Alexandre J. Chorin

We use a frequentist statistical approach to set confidence intervals on the values of cosmological parameters using the MAXIMA-1 and COBE measurements of the angular power spectrum of the cosmic microwave background. We define a $\Delta…

Gaussian time-series models are often specified through their spectral density. Such models present several computational challenges, in particular because of the non-sparse nature of the covariance matrix. We derive a fast approximation of…

Computation · Statistics 2012-11-20 Nicolas Chopin , Judith Rousseau , Brunero Liseo

Soft cosmology is an extension of standard cosmology allowing for a scale-dependent equation-of-state (EoS) parameter in the dark sectors, which is one of the properties of soft materials in condensed-matter physics, that may arise either…

Cosmology and Nongalactic Astrophysics · Physics 2022-12-12 Emmanuel N. Saridakis , Weiqiang Yang , Supriya Pan , Fotios K. Anagnostopoulos , Spyros Basilakos

In the second paper of this series we extend our Bayesian reanalysis of the evidence for a cosmic variation of the fine structure constant to the semi-parametric modelling regime. By adopting a mixture of Dirichlet processes prior for the…

Instrumentation and Methods for Astrophysics · Physics 2013-09-12 Ewan Cameron , Tony Pettitt

Approximate Bayesian Computation (ABC) is typically used when the likelihood is either unavailable or intractable but where data can be simulated under different parameter settings using a forward model. Despite the recent interest in ABC,…

Methodology · Statistics 2019-12-24 Rafael Izbicki , Ann B. Lee , Taylor Pospisil

Practical or scientific considerations often lead to selecting a subset of parameters as ``important.'' Inferences about those parameters often are based on the same data used to select them in the first place. That can make the reported…

Methodology · Statistics 2019-06-04 Yoav Benjamini , Yotam Hechtlinger , Philip B. Stark

Confidence intervals for a binomial parameter or for the ratio of Poisson means are commonly desired in high energy physics (HEP) applications such as measuring a detection efficiency or branching ratio. Due to the discreteness of the data,…

Data Analysis, Statistics and Probability · Physics 2009-12-23 Robert D. Cousins , Kathryn E. Hymes , Jordan Tucker