Related papers: Dynamics in parallel of double Boolean automata ci…
We represent a filamentous actin molecule as a graph of finite-state machines (F-actin automaton). Each node in the graph takes three states --- resting, excited, refractory. All nodes update their states simultaneously and by the same…
Sequences of neural activity arise in many brain areas, including cortex, hippocampus, and central pattern generator circuits that underlie rhythmic behaviors like locomotion. While network architectures supporting sequence generation vary…
This article presents the consensus of a saturated second order multi-agent system with non-switching dynamics that can be represented by a directed graph. The system is affected by data processing (input delay) and communication…
Many systems of interest in science and engineering are made up of interacting subsystems. These subsystems, in turn, could be made up of collections of smaller interacting subsystems and so on. In a series of papers David Spivak with…
Two-dimensional nine neighbor hood rectangular Cellular Automata rules can be modeled using many different techniques like Rule matrices, State Transition Diagrams, Boolean functions, Algebraic Normal Form etc. In this paper, a new model is…
Starting from Anosov chaotic dynamics of geodesic flow on a surface of negative curvature, we develop and consider a number of self-oscillatory systems including those with hinged mechanical coupling of three rotators and a system of…
Numerous studies have reported two types of doubling of invariant closed curves (ICCs) in dynamical systems: (a) the creation of two disjoint ICCs such that iterations flip between them; and (b) the creation of a single ICC of double the…
We study the problem of persistence of attractors with smooth boundary for a class of set-valued dynamical systems that naturally arise in the context of random and control dynamical systems, as well as in systems modeling the dynamical…
Slow adaption processes, like synaptic and intrinsic plasticity, abound in the brain and shape the landscape for the neural dynamics occurring on substantially faster timescales. At any given time the network is characterized by a set of…
Higher dimensional automata, i.e. labelled precubical sets, model concurrent systems. We introduce the homology graph of an HDA, which is a directed graph whose nodes are the homology classes of the HDA. We show that the homology graph is…
To model biological systems using networks, it is desirable to allow more than two levels of expression for the nodes and to allow the introduction of parameters. Various modeling and simulation methods addressing these needs using Boolean…
Feng and Wang showed that two homogeneous iterated function systems in $\mathbb{R}$ with multiplicatively independent contraction ratios necessarily have different attractors. In this paper, we extend this result to graph directed iterated…
We investigate the equilibria of a random model network exhibiting extensive chaos. In this regime, a large number of equilibria is present. They are all saddles with low-dimensional unstable manifolds. Surprisingly, despite network's…
The growth of the entanglement between two disjoint intervals and its complement after a quantum quench is regarded as a dynamical chaos indicator. Namely, it is expected to show qualitatively different behaviours depending on whether the…
Many natural systems are organized as networks, in which the nodes (be they cells, individuals or populations) interact in a time-dependent fashion. The dynamic behavior of these networks depends on how these nodes are connected, which can…
In this paper, the D2-IBC (Data-Driven Inversion Based Control) approach for nonlinear control is introduced and analyzed. The method does not require any a-priori knowledge of the system dynamics and relies on a two degrees of freedom…
The algebraic structure of the attractors in a dynamical system determine much of its global dynamics. The collection of all attractors has a natural lattice structure, and this structure can be detected through attracting neighborhoods,…
Dynamical coupled-channel (DCC) approaches parametrize the interactions and dynamics of two and more hadrons and their response to different electroweak probes. The inclusion of unitarity, three-body channels, and other properties from…
The saddle-node bifurcation on an invariant circle (SNIC) is one of the codimension-one routes to creation or destruction of a periodic orbit in a continuous-time dynamical system. It governs the transition from resting behaviour to…
This paper studies a dynamical system, which contains two contours. There is a cluster on each contour. The cluster contains particles, located in adjacent cells. The clusters move under prescribed rules. The delays of clusters are due to…