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Related papers: Contact processes and moment closure on adaptive n…

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Approximate solutions of the chemical master equation and the chemical Fokker-Planck equation are an important tool in the analysis of biomolecular reaction networks. Previous studies have highlighted a number of problems with the…

Quantitative Methods · Quantitative Biology 2018-05-22 Leo Bronstein , Heinz Koeppl

Moment-closure techniques are commonly used to generate low-dimensional deterministic models to approximate the average dynamics of stochastic systems on networks. The quality of such closures is usually difficult to asses and the…

Populations and Evolution · Quantitative Biology 2015-05-14 Lorenzo Pellis , Thomas House , Matt J. Keeling

Many epidemic processes in networks spread by stochastic contacts among their connected vertices. There are two limiting cases widely analyzed in the physics literature, the so-called contact process (CP) where the contagion is expanded at…

Computational Physics · Physics 2010-02-19 S. Gomez , A. Arenas , J. Borge-Holthoefer , S. Meloni , Y. Moreno

The one-dimensional contact process is analyzed by a cluster approximation. In this approach, the hierarchy of rate equations for the densities of finite length empty intervals are truncated under the assumption that adjacent intervals are…

Condensed Matter · Physics 2009-10-22 E. Ben-Naim , P. L. Krapivsky

Networks are useful for describing systems of interacting objects, where the nodes represent the objects and the edges represent the interactions between them. The applications include chemical and metabolic systems, food webs as well as…

Computational Physics · Physics 2009-10-20 Baruch Barzel , Ofer Biham

Cells can utilize chemical communication to exchange information and coordinate their behavior in the presence of noise. Communication can reduce noise to shape a collective response, or amplify noise to generate distinct phenotypic…

Molecular Networks · Quantitative Biology 2019-09-24 David T. Gonzales , T-Y Dora Tang , Christoph Zechner

In the study of dynamics on networks, moment closure is a commonly used method to obtain low-dimensional evolution equations amenable to analysis. The variables in the evolution equations are mean counts of subgraph states and are referred…

Dynamical Systems · Mathematics 2022-12-07 Bert Wuyts , Jan Sieber

Moment closure methods appear in myriad scientific disciplines in the modelling of complex systems. The goal is to achieve a closed form of a large, usually even infinite, set of coupled differential (or difference) equations. Each equation…

Statistical Mechanics · Physics 2018-12-24 Christian Kuehn

Co-evolutionary adaptive mechanisms are not only ubiquitous in nature, but also beneficial for the functioning of a variety of systems. We here consider an adaptive network of oscillators with a stochastic, fitness-based, rule of…

Physics and Society · Physics 2016-06-08 Young-Ho Eom , Stefano Boccaletti , Guido Caldarelli

In most natural sciences there is currently the insight that it is necessary to bridge gaps between different processes which can be observed on different scales. This is especially true in the field of chemical reactions where the…

Molecular Networks · Quantitative Biology 2008-03-03 L. Sbano , M. Kirkilionis

We study the problem of synchronizing a general complex network by means of an adaptive strategy in the case where the network topology is slowly time varying and every node receives at each time only one aggregate signal from the set of…

Disordered Systems and Neural Networks · Physics 2009-11-13 Francesco Sorrentino , Edward Ott

Human social interactions are typically recorded as time-specific dyadic interactions, and represented as evolving (temporal) networks, where links are activated/deactivated over time. However, individuals can interact in groups of more…

Physics and Society · Physics 2022-11-03 Alberto Ceria , Huijuan Wang

Network dynamics offers critical insights into the behavior and evolution of complex systems. Here, we focus on the topological dynamics of networks to explore a unique process for reducing the average distance: topological compression. The…

General Topology · Mathematics 2025-08-07 Jian-Hui Li , Zu-Guo Yu , Yu-Chu Tian

Many real world networks are characterized by adaptive changes in their topology depending on the dynamic state of their nodes. Here we study epidemic dynamics in an adaptive network, where susceptibles are able to avoid contact with…

Populations and Evolution · Quantitative Biology 2007-05-23 Thilo Gross , Carlos Dommar D'Lima , Bernd Blasius

Adaptive networks are well-suited to perform decentralized information processing and optimization tasks and to model various types of self-organized and complex behavior encountered in nature. Adaptive networks consist of a collection of…

Multiagent Systems · Computer Science 2013-05-07 Ali H. Sayed

Moment methods are classical approaches that approximate the mesoscopic radiative transfer equation by a system of macroscopic moment equations. An expansion in the angular variables transforms the original equation into a system of…

Mathematical Physics · Physics 2023-08-17 Martin Frank , Benjamin Seibold

Network topology and nodal dynamics are two fundamental stones of adaptive networks. Detailed and accurate knowledge of these two ingredients is crucial for understanding the evolution and mechanism of adaptive networks. In this paper, by…

Physics and Society · Physics 2013-09-24 Jie Zhou , Gaoxi Xiao , Guanrong Chen

Real-world network systems are inherently dynamic, with network topologies undergoing continuous changes over time. Previous works often focus on static networks or rely on complete prior knowledge of evolving topologies, whereas real-world…

Systems and Control · Electrical Eng. & Systems 2025-09-03 Chunyu Pan , Xizhe Zhang , Haoyu Zheng , Zhao Su , Changsheng Zhang , Weixiong Zhang

The message passing approach of Karrer and Newman [Phys. Rev. E 82, 016101 (2010)] is an exact and practicable representation of susceptible-infected-recovered dynamics on finite trees. Here we show that, assuming Poisson contact processes,…

Populations and Evolution · Quantitative Biology 2014-02-26 Robert R. Wilkinson , Kieran J. Sharkey

We present simulation results for the contact process on regular, cubic networks that are composed of a one-dimensional lattice and a set of long edges with unbounded length. Networks with different sets of long edges are considered, that…

Statistical Mechanics · Physics 2015-05-13 R. Juhász , G. Ódor